Lytechinus variegatus (green sea urchin): 121405997
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Entry
121405997 CDS
T11173
Name
(RefSeq) caltractin-like isoform X1
KO
K16465
centrin-1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lvg03036
]
121405997
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lvg03037
]
121405997
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121405997
Cilium and associated proteins [BR:
lvg03037
]
Motile cilia and associated proteins
Dynein arm
121405997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
AIF-1
EF-hand_5
EF_EFCAB10_C
DUF5580_M
SurA_N_3
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
121405997
NCBI-ProteinID:
XP_041452928
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All DBs
Position
19:complement(4466074..4470525)
Genome browser
AA seq
193 aa
AA seq
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MAAPPSSSLSSSQGQMGVASSLLHSLEQQRDHVAEIDPALTAQFTAQELRDLRMVFDTFD
KNKKGYIDAFDLRSAMRVLGFKLSHEQIDEAIADIGRRIGEVSFPDFVELVAHRQGDSRD
IYDEIHQGFDMMDYGKKGCLSTDDLKMVAKETGVKVSDSMIREMIEEASSSGDNTINRDE
FVAVMLQTNMYKE
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccaccgtcgtcatcgctctcctcctcccaaggtcaaatgggcgtggccagc
agtctccttcactcattggagcaacagagggatcacgtggctgaaatagaccccgccctc
actgcgcagttcacggcgcaggagctccgagatttgaggatggtatttgatacatttgat
aagaataaaaaaggatacatcgatgcttttgatcttcggagtgcaatgagagttcttggg
tttaaactttctcatgagcaaatagatgaagctatagctgacattggcagaagaataggg
gaagtgagtttcccagactttgttgagctggtagcacatcgccagggagactcaagagac
atctacgatgagatacaccaaggctttgatatgatggattacgggaagaaaggatgcctg
agtacggatgatctcaagatggttgccaaggaaaccggggtcaaggtcagcgatagcatg
atcagagagatgatcgaggaggcaagtagcagtggtgacaacactatcaacagagacgag
tttgttgccgtcatgttgcagacgaacatgtacaaagaatga
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