Lytechinus variegatus (green sea urchin): 121406067
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Entry
121406067 CDS
T11173
Name
(RefSeq) nucleoporin Nup37-like
KO
K14302
nuclear pore complex protein Nup37
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121406067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121406067
03036 Chromosome and associated proteins [BR:
lvg03036
]
121406067
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121406067
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121406067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_RFWD3
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
121406067
NCBI-ProteinID:
XP_041453010
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Position
19:complement(16719885..16727970)
Genome browser
AA seq
320 aa
AA seq
DB search
MSSPSKRNGYSFESRDTVSCVEFSAFEHSSSLIAFGGDLRVSIGTCRFQEQDNSLAGCDY
QHIRDFHHRTRVMSIAWSPQTALDVLPRCIRFCTAGIDHKIRIFTSDLKDQDTVKVIRGH
QDFINSLTFEPIKGELIASVSDDQTCRLWDHDGRQRALFPLKSAGMSVCWNQSDPNKLMV
AEKGGTLRFYDLVSEQPFMSLETGRPGLMCADWSLCDPTRVGAIVSGEWMVWDITRSSQA
QDSELAHGEGGKEFRWCRSSPNLFATTGRPNNEAKVYHLGHHQVPVTESLPVLGGLSWHA
FLPICAVGGDRRVHLFPAEP
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagttccccatcgaagaggaatggttacagctttgaatcaagagatacagtatcttgt
gtagaattttcagccttcgaacactcatcttctctcattgcatttgggggagatcttcga
gttagcattgggacatgcaggtttcaggaacaagacaactcccttgctggatgtgactac
cagcatattcgggacttccatcatcgtaccagagtaatgagcatagcatggagtccacaa
acagcattggatgtcctacctcggtgtattaggttttgcacagctggcatagatcacaag
ataagaatattcacttctgacctgaaagatcaagacactgtcaaggtcatccgaggtcac
caagacttcatcaactctctgacctttgaacccatcaaaggagaattgatcgcgagcgtg
agcgacgatcagacctgtagactgtgggatcatgatggccgacagagggcgctgtttcct
ctgaagtctgcgggcatgtctgtctgctggaaccagagcgaccccaataagcttatggta
gctgaaaagggcggaaccctacgcttctatgacctagtgagtgagcagccgttcatgtcg
cttgagaccggtagaccaggtctcatgtgtgcagactggagcctctgtgatcctaccagg
gttggggctatcgtcagtggagagtggatggtgtgggacatcacaaggtcaagtcaagct
caagattctgagttggctcatggtgaaggaggcaaagagttccgatggtgcagatctagc
cctaacctgtttgctactacagggcgtcccaacaatgaagccaaagtctaccacttaggg
catcaccaggtccctgtcactgagagtctaccagtgctaggtggtctgtcctggcacgca
ttcttaccaatctgtgctgtcgggggcgacaggagggtccacttgtttccggccgaacct
tga
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