Lytechinus variegatus (green sea urchin): 121406152
Help
Entry
121406152 CDS
T11173
Name
(RefSeq) nuclear pore complex protein Nup205-like
KO
K14310
nuclear pore complex protein Nup205
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121406152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121406152
03036 Chromosome and associated proteins [BR:
lvg03036
]
121406152
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121406152
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121406152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
121406152
NCBI-ProteinID:
XP_041453102
LinkDB
All DBs
Position
19:7714140..7767244
Genome browser
AA seq
2095 aa
AA seq
DB search
MTLDGALNVDWESVKMAERMAVNLGSRIWGPYKELYHTVSLIVSKRCPDPYQELDAIIRK
HKPDFVALLKNPAKNSQHREQIKKADVEGVVISGQARSRVLPRQLIEEALIISDLFDLNE
YAAVELLLAGDQQQPHFPGLPRGLVAVLLYYDGRCSLINTLQLLIQSRRGRTWTFDLDDE
VVDLVTSFTDDLVSEGLVKKVLEFLKKMDVVKEMNDLAKERALGGPKHRHDVQEFIRGVR
SSLADCLYCFACQTPFGRKDTILLAKHLMNEIELNANGSIDECSIALLMAFMYSIDTGVI
EQRPEDREEMEQQLPILKDNQYLPAIHDLMTSEDEGQWKVKGIKGVMQLAWALTLRNSAQ
LPELSRFQDQIEEDEILVDRALQTDVFSFINKSLIANKVFHQNEFYIRRIHGLITDFIFQ
MPLKVKEIRNRGDEAGRLMMSYEREGLEVNPNLPRHFEDFLHLFGYLYEKDPLDLELSLD
YWNPPERGNSPGGGGASYISIYHHKQSQRQVSLFKFVRMAGDLLPPSLYIPYLHMLQGVS
NSHQSAHHCFNLLKANGMGGAGASVGSVSWDHFFFSLNRYYSSLRQEIRSTSPFQEVGQS
AQSFRLGAKGITPQEMEGLINVLKLVQVVARENEDARIAMVENQSWLPTVLLFGLLTCSI
PPPLKAECLRTLAVFAQSPDIAVTLWQSLEVSQIIPTVPQAGVTPSGILLELEEIESNNE
EYPLTRGFLALVDALTEVPIPVMLGVGYRPPGFDPYLKFLRDSVFLKFRTRAYRNPAEKW
EVAAAVTKILCKLLASHEPHPEEFQDHVVEIQGGGTAITNKPPGHHLLVHMLNDSSMLQL
ILGILDESIRLLSQYHTFPGKESMTECALNCLTMLDLALEKQDKFIDLLRGQASSLMVTP
LDQLLMGINPRSGRADHLCHVAKFVSFNVSLPKHSLAAVKVLYRMVKSSNVQPEIVNLFS
INKEESGRILHGFVECLEVEDLEVTETEAFQEEDADHGSDESSRLHSQTRLYAMRLLLFS
LGQPGPNLAHFLLGYNTRKPVNKTELQDPGVLGSPRTCLHAVVSVLERGITSHSGPSAIH
NTPQLAELAYELIYRLCANRETSAPTMRYLRTTQDFFYKHLRHAPFTNGNGEETEERILL
NQQAWLLKSVAIELRLTAVNRQRSHSQRLLRLLLEDTASQVNDDVDGSVDWDRVTMEAST
LGTSMAQTHADTKGPGLQMRRRILQLLDSVEFSQTFPAPLRLESFEPSGVEQTILNCEEK
NEYGVLLCNLRLLHHILVDQLNRHGASGSVVGQRSRVEMEIREILRTAVSRNSVRRSLAA
KRHGFDAWRQVLEVLLTSLPQESLALEIRQKVTVDILQELLQKVNQEDSVSELTSPVSGA
FLLLAMTLRQCSISDNAQSVANLMSSQYVNVLDGSMVQTLDSSVLSGGDTDGRRGGGVQI
PVVSLTAILKELLTFILSTGGAQQRVRTNLYGALLNYLQIPQKPKEIPTLQASTAMNSAI
LEEYHRVMTANLAVIQEFGEPFCELVSRDACDGHELGRTLALSVVDAINSIDRRGHWLSI
LISKGYLSHFIEELLRMDQSLQSCLQPNPEPMKALYIYESTLSLLMRVAESANGAQALLQ
MGLMERLGQCRFIDLRPEHHTISSHPRLVEGMEAIAVDSFLPDVMSRYHQLLFPVLRLCT
AILTSLGSQHKEATNQVLHFVIAHADTFTAILREQHQRPERESLEELSLVTGVICTVMGE
VDYFDPSLLETSVHAQIPVQTHLTRLHRQILALVPRYCSLDQWLKELKSAEGWQRGAADR
RGAEEEHRADAETEGKGMNARLFYLEIVSHVIGYCRTVVVRSGNNADEYQVIFTPSLQEA
VARDYQRLEASAMASLDVSKPPGLGVIVRHLHQSAAQFMVAMEMHQQSLHKLQNIADLPA
EELKELSHSNVGSRSTTQHRLQLATRRLTQDVRTRVKELSILFYSIECDVFLIWRHLEYY
FLHCHPTGGPSAPFLLSFALRQPPRNLGDLSSPSLNVTQDESQSRFPPVSPQALGITQDD
LKQLRLDATKCLNDPLLKRVQEIESRFQAQRRSKHAFVAALVRRIRRLVTLDAPR
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atgacgttagatggcgctctaaacgtcgactgggagtcggtcaaaatggcagaacgcatg
gcggttaatttgggctccaggatatggggtccatacaaggagctctaccatactgtctcc
ctcatcgtctccaagagatgcccggatccttaccaggagcttgatgccatcatcagaaaa
cacaaaccagactttgttgcccttctgaagaatccagcaaagaattcgcaacacagagaa
cagatcaagaaagccgacgttgaaggcgtcgttatttcaggacaagcaaggagtcgcgtg
ctaccacggcaactcattgaagaggctcttatcatcagcgacctttttgatctgaacgag
tatgcagctgtggagctacttctggcaggagaccaacaacagcctcattttcctggccta
ccgcgtggcctggtcgctgtcctactctactacgatggccggtgcagcctcatcaacacc
ctacagcttctgatccagtcacgccgtggtcgtacatggacctttgacctcgacgatgaa
gtcgttgacctcgtaacgtcattcaccgatgacctcgtctctgaggggctggtcaagaag
gtgctggagtttctgaagaagatggatgtcgtcaaggagatgaatgacctggctaaggag
agggcccttggagggccaaagcaccgacatgatgtccaggagtttattcgtggtgtccgt
tcctctctcgccgactgcctctactgctttgcctgtcagacaccctttgggagaaaggat
accattcttcttgccaagcatctgatgaacgagatagagttgaatgcaaacggtagtatt
gatgaatgctccatagcccttctcatggccttcatgtacagcattgatacaggtgtaata
gaacagagaccggaggacagagaagagatggagcagcagctaccaatcttgaaggataac
cagtatcttcctgcaatccatgaccttatgacctctgaagacgaaggtcagtggaaggtc
aaagggatcaagggggtcatgcagctggcctgggcgttgaccctgaggaattctgctcag
ctaccagaactttcacgatttcaagatcagatagaagaagatgaaatcctggttgataga
gctcttcaaactgatgtcttctcgttcatcaataaatctctcatcgcaaacaaagtcttc
catcaaaatgaattctacatccgtcgaatccatggcctcataacagacttcatctttcag
atgcctctcaaggtgaaagagatccgtaaccgtggcgatgaagctggtcgtctaatgatg
tcatatgaaagagaaggtttagaagtcaacccaaacttgccaagacattttgaagatttc
ttgcacctgtttggatatttgtatgagaaggatcctcttgatctggagctatcccttgat
tactggaatccacccgagaggggtaatagccccggaggagggggcgcaagctacatcagt
atctaccatcataaacaatcacagcgacaggtgagcctgttcaagtttgtccgtatggca
ggagatctccttcccccatcactctacatcccatatctacacatgctacagggtgtgtca
aacagccaccagagtgcccatcattgcttcaacctactcaaagcaaatggaatgggagga
gctggtgcaagtgtgggcagtgtatcatgggatcacttcttcttctcactcaatcgctac
tactcgtccctccgacaagagatacgctcaacctccccttttcaggaagtgggccagtcc
gcccagtcattcaggcttggggccaaggggatcactccacaggagatggaggggttgatc
aatgtcctcaagcttgtccaagttgttgctagagagaacgaggatgcaagaatagcgatg
gtagaaaatcagtcatggctgccaacggttcttctgtttggtctgttaacatgtagcatc
cctccaccactcaaagcagaatgccttagaacattagcagtatttgctcaatctcctgac
atagcagtaaccctctggcaatcgcttgaagtttctcagatcatacctactgttcctcaa
gctggtgttactccctctggaattctcctggagttagaggagatagagtccaacaacgaa
gagtatcctctgacccgcggtttcctagccttggtggatgccctgactgaggtccctata
cccgtcatgttaggagttggttacagacctccaggttttgatccttacctcaagttcctt
agggattctgtgttcctcaagttccgcacccgggcttatcgcaacccagcagaaaagtgg
gaagtggcagccgctgtgaccaagatcctctgtaagcttctagccagccatgagcctcac
ccggaagagttccaagaccacgtcgtagagattcagggaggtggaacagctatcaccaac
aagcctcctggacatcatctcctagttcacatgctgaacgatagttccatgcttcaattg
attctaggcatcttagatgagagcattcgcttactctcgcagtaccacacgttcccaggc
aaggaaagcatgacggagtgcgccctcaactgcttgactatgcttgacctggccctggag
aaacaggacaagttcattgaccttttgagaggtcaagcatcgagtctaatggtcactcca
cttgaccagttactaatgggtatcaacccaaggtccggccgtgctgaccatctctgtcat
gttgcgaagtttgtgagtttcaatgtatcccttcccaagcattcgctagcagcggtcaag
gttctctatcgaatggtcaagtcttccaatgtccaacccgagattgtcaatctcttctcc
atcaataaggaggaatcaggtcgtattcttcatggatttgtcgagtgtcttgaggtagaa
gatctggaagtaactgagaccgaagcttttcaagaagaagatgctgaccatggcagcgat
gaatcctctcgacttcacagccaaacacgtctctatgccatgagactcctcttattctca
ctcggtcaaccaggacctaacctcgcacacttcctcctcggctataacacaaggaaaccg
gttaacaagactgaactacaagacccaggtgtgcttggctccccacgcacctgcctccac
gcggtcgtctcggtcctagagcgcggcatcacgtcccactctggcccgtcggctatccac
aacacgcctcagctagccgagcttgcctacgagctcatataccgtctgtgcgcgaaccgt
gagaccagcgctcccaccatgcgctacctccgcaccactcaagacttcttctacaagcat
ctcaggcatgctccgtttaccaacggcaatggagaagagactgaagagcgtatcctattg
aatcaacaagcctggcttctcaagtctgtagccatcgagcttagattgacggctgtcaat
cgtcagaggtctcatagccaacgtcttctgcgtctcctacttgaagacacagcctcgcag
gtcaatgatgatgtggatgggtctgtagattgggacagagttacaatggaagcaagtaca
cttggaactagcatggcacagacacacgctgatactaaagggccaggccttcagatgaga
agacgtatcctgcagctcttggactccgtggagttcagccaaaccttccccgccccgctt
cgtctggagtccttcgagccatcgggtgtagaacagacaatcttaaactgcgaagagaag
aatgaatatggtgtcctgctgtgcaatctgagacttcttcatcatatcctggttgaccaa
ctcaatcgacatggggcatctgggtcagtcgtaggtcagaggtcaagggttgaaatggag
attagggagattctgagaactgctgtctcaaggaacagcgtaagacgttcattggctgcc
aagcgccatgggtttgatgcctggcgtcaggttcttgaggtgctgctgacgtctttgcct
caggaatcccttgcattggagattaggcagaaggttactgtggatatccttcaagaactc
cttcaaaaggtaaaccaagaggactctgtttccgagctgacctcaccagtctccggagcc
ttccttctcctagccatgaccctccgacagtgctctatctcagacaatgcccagtcggta
gccaatctcatgtcgtcacagtatgtcaacgtcctagacgggtctatggtgcagacgttg
gattcgtcggtactgagtggaggggataccgatggaagaagaggaggaggggtacagatt
ccagtcgtgtcgttgacagcgatcctcaaggaacttctgactttcatactttcaacaggt
ggtgcccaacagcgtgtccgtaccaatctctatggggctctactcaactaccttcagatc
ccacagaaacccaaggagatccccaccctccaggcctcgacagccatgaactcggccatc
ctagaggaatatcatcgggtcatgaccgccaaccttgccgtcatccaggagtttggagag
ccattctgtgagctggtctccagagatgcatgtgatgggcatgaactgggaaggacattg
gcattgtccgtcgttgatgccatcaactccattgacagacgaggccattggctgagtatc
ctgatatccaagggctacttgagtcactttattgaagagctacttcgcatggatcaatcg
ttacagagctgtctacaacccaacccagaacccatgaaggcactctacatatatgaatct
actctgtccttattgatgagagttgctgagagtgccaacggtgcccaagcattactacag
atgggtctgatggaaagactaggccagtgcaggtttatagacctaagaccagaacaccac
acaatcagtagtcacccaaggttagttgaaggcatggaagcaatcgctgtggattctttc
cttcctgatgtaatgagtcgctatcatcaactactcttcccagttctaaggttatgcaca
gcaattctcacttccctaggcagtcaacacaaggaggctaccaatcaggtgctccacttt
gttatagctcacgcagacaccttcactgcgatcttacgggagcagcatcaacgtcctgag
agagaatcgcttgaggaactttctcttgtaacaggggttatatgcactgtcatgggcgaa
gttgactactttgacccatctttgttggagacgagcgtccatgcccagataccggtccag
acccatcttacccggctccatcgtcagatccttgccttggtacccagatactgcagcctt
gaccagtggctcaaggagctgaagagtgctgagggatggcagaggggtgcagcagataga
cggggtgcggaggaagagcacagagcggacgccgagacggaaggcaaagggatgaatgcg
aggttgttctacctcgagatcgtgagccatgtgattggatactgtcgaactgtggtcgtt
cgttcaggtaataacgctgatgaatatcaggtcatcttcactccttcccttcaagaggct
gtagcacgagactaccaaagactagaagcctcggcgatggcttcgcttgatgtcagcaaa
cctcccggtcttggggtcatcgttagacatcttcatcagtctgctgctcaattcatggtt
gccatggagatgcatcaacagtcccttcacaagcttcagaatattgcggatctgccagca
gaggaattgaaagagttgtcacatagcaacgtaggctcacgatcaaccacccagcatcgt
cttcaattagcgacacgaaggctcactcaagatgtccgtactagagtcaaggaactctca
atccttttctattccatagaatgtgatgtcttcttaatctggcgccatctggagtactat
ttcttgcattgtcatcctactgggggtccctcagcaccctttttgctctccttcgctctt
cgtcagccaccaaggaatttaggagatctgtcaagtccatcactaaacgtcacccaggat
gagagccaatcccgtttcccgccagtcagtcctcaagctctaggtatcacccaagatgat
cttaagcagctacgcctcgatgccacaaagtgcctcaacgatccgctcctgaagcgtgtc
caggagatcgagtctcgtttccaagcgcagcgtcgatccaagcatgcctttgtcgcggcg
ttggttcggcgtatccggcgtctagtcacgttggatgcacctaggtga
DBGET
integrated database retrieval system
