Lytechinus variegatus (green sea urchin): 121406291
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Entry
121406291 CDS
T11173
Name
(RefSeq) P-selectin-like
KO
K06496
selectin, platelet
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lvg04515
]
121406291
04090 CD molecules [BR:
lvg04090
]
121406291
00536 Glycosaminoglycan binding proteins [BR:
lvg00536
]
121406291
04091 Lectins [BR:
lvg04091
]
121406291
Cell adhesion molecules [BR:
lvg04515
]
Lectins
Selectins and C-type lectins
121406291
CD molecules [BR:
lvg04090
]
Proteins
121406291
Glycosaminoglycan binding proteins [BR:
lvg00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
121406291
Lectins [BR:
lvg04091
]
C-Type lectins
Selectins
121406291
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
DERM
Motif
Other DBs
NCBI-GeneID:
121406291
NCBI-ProteinID:
XP_041453240
LinkDB
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Position
19:complement(13478362..13515695)
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AA seq
586 aa
AA seq
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MPLCPANVSSSSSTSQTIHLAWVPCVVDVLILQSFQSFTLQASSSTECPYSASISIANNH
VHSIWTDVACHTRPPDQPLATLDLGPAELSTPEGCDHALRGLGLHHLTIDVVKCIVTLFG
DEVSSSCTPVTQVDYQEECTFSCPAGYDLIGPSSVTCTSSGDFSDVFPECEVVTCIVTLF
GDKVSSSCTPVTQVDYQEECTFSCPAGYDLIGPSSVICTSSGDFSDVFPECEVVTCIVAL
FGDKVSSSCTPVTQVDYQEECTFSCPAGYELIGPSSVTCTSSGDFSDVFPECEVVTCIVT
LFGDKVSSSCTPVTQVDYQEECTFSCPAGYELIGPSSVTCTSSGDFSDEFPVCEVVTCIV
TLFGDKVSSSCTPVTQVDYQEECTFSCPAGYELIGSSSVTCTSSGDFSDVFPECEAGYEL
VGPSSVTCTSSGDFSDVFPECEVVTCTVTLFGDNVSSSCTPATQVDYQEECTFSCPAGYE
LIGPSSVTCTSFGGFSDVFPECEVVTCTVTLFGDKVSSSCTPATQVDYQEECTFSCPAGY
ELIGPSSVTCTSFGGFSDVFPECEAINFESPMVPFVTTCTTVGRRF
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtgcccggctaacgtcagcagcagtagctctacttcgcaaactatccatctt
gcatgggtgccatgtgtcgtggatgtgttgattttgcagagctttcagtcgttcaccctg
caagcgtcatcttcaactgaatgtccgtactcggctagcatctcaatcgctaataatcac
gttcattccatctggacggatgtcgcttgccatactcgccctccagatcagccccttgct
accttagaccttggccctgctgaactgtccactcctgaaggatgtgatcatgcgcttcgc
ggtttaggactccatcacctaactatcgatgtcgtgaagtgcattgtaactttatttgga
gacgaagtaagttcatcgtgtacacctgtcactcaagtagactaccaagaagaatgtacc
ttttcttgtccagctggttacgacctgatcggaccttcatccgttacctgcacgagctct
ggagatttctcagatgtatttcccgaatgtgaggtcgtgacgtgcattgtaactttattt
ggagacaaagtaagttcatcgtgtacacctgtcactcaagtagactaccaagaagaatgt
accttttcttgtccagctggttacgacctgatcggaccgtcatctgttatctgcacgagc
tctggagatttctcagacgtatttcccgaatgtgaggttgtgacgtgcattgtagcttta
tttggagacaaagtaagttcttcgtgcacacctgtcactcaagtagactaccaagaagaa
tgtaccttttcttgtccagctggatatgagctgatcggaccgtcatccgttacctgcacg
agctctggagatttctcagacgtatttcccgaatgtgaggtcgtgacgtgcattgtaact
ttatttggagacaaagtaagttcatcgtgtacacctgtcactcaagtagactaccaagaa
gaatgtacgttttcttgtccagctggttatgagctgatcggaccgtcatccgttacctgc
acgagctctggagatttctcagacgaatttcccgtatgtgaggtcgtgacgtgcattgta
actttatttggagacaaagtaagttcatcgtgtacacctgtcactcaagtagactaccaa
gaagaatgtaccttttcttgtccagctggttatgagctgatcggatcgtcatccgttacc
tgcacgagctctggagatttctcagacgtatttcccgaatgtgaggctggttatgagctg
gttggaccgtcatccgttacctgcacgagctctggagatttctcagacgtatttcccgaa
tgtgaggtcgtgacgtgcactgtaactttatttggagacaatgtaagttcatcgtgtaca
cctgccactcaagtagactaccaagaagaatgtaccttttcttgtccagctggttatgag
ctgatcggaccgtcatccgttacctgcacgagctttggaggtttctcagacgtatttccc
gaatgtgaagtcgtgacgtgcactgtaactttatttggagacaaagtaagttcatcgtgt
acacctgccactcaagtagactaccaagaagaatgtaccttttcttgtccagctggttat
gagctgatcggaccgtcatccgttacctgcacgagctttggaggtttctcagacgtattt
cccgaatgtgaggcgatcaatttcgaaagtccaatggtgccgttcgtaacgacttgcact
acagtgggaaggaggttctag
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