Lytechinus variegatus (green sea urchin): 121406813
Help
Entry
121406813 CDS
T11173
Name
(RefSeq) deoxycytidylate deaminase-like
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00240
Pyrimidine metabolism
lvg01100
Metabolic pathways
lvg01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
121406813
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lvg02044
]
121406813
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
121406813
Secretion system [BR:
lvg02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
121406813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
SNAD4
Bd3614-deam
APOBEC_N
APOBEC4_like
Motif
Other DBs
NCBI-GeneID:
121406813
NCBI-ProteinID:
XP_041453620
LinkDB
All DBs
Position
1:14454891..14477263
Genome browser
AA seq
236 aa
AA seq
DB search
MQTPPRQQKYFPSKAAEEIANVTPTKLMNKSKISDINQNEKNEPRPSPSDDIILTQATKR
LDYLPWEDYFMAVAFLSAQRSKDPSSQVGACIVNEEKKIVGIGYNGMPNGCHDDALPWSR
ENEDWLETKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKVIIQSGIKKIIFLS
DKYHETDTMTASRRMLDYAGVTYSKFTPSKQTVTIDFYTLDPQARPKDENKNEEQP
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaccaccgaggcaacaaaaatatttcccaagcaaggctgcagaggagatagca
aatgtaactcccacaaagttgatgaacaagtcaaagatttcagacattaatcaaaatgag
aagaatgaaccaagaccaagccctagcgatgacattatactcacacaagccacaaagaga
ttggactatctaccctgggaggattatttcatggcggtagcatttttgtccgcccagcgg
agcaaggacccaagttctcaggttggtgcttgtatcgtgaatgaagagaaaaagatcgtt
ggtattggctacaatgggatgcccaatggttgccatgacgatgcattaccatggagtaga
gaaaacgaggactggctggagactaagtatccatatgtttgccatgccgagctgaacgcc
atcatgaacaagaactctgcagatgtgaagggatgtactatgtatgtagctctctttccc
tgcaacgagtgtgctaaggtcattatacagtcggggatcaaaaagatcatcttcctctcc
gataaataccatgagactgacacaatgacggcttcaaggagaatgctggattatgctgga
gtaacttacagtaaattcacaccatctaagcaaacagtcacgatagatttctacacattg
gatccacaagcaagacccaaagacgagaacaaaaacgaagagcaaccctaa
DBGET
integrated database retrieval system
