Lytechinus variegatus (green sea urchin): 121406848
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Entry
121406848 CDS
T11173
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121406848
Ion channels [BR:
lvg04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
121406848
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
VWA_CoxE
VWA_3
DNA_pol3_finger
GBD_Hemicentin
Motif
Other DBs
NCBI-GeneID:
121406848
NCBI-ProteinID:
XP_041453653
LinkDB
All DBs
Position
2:50205826..50287748
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AA seq
1650 aa
AA seq
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MSPIEFGDRWYRAYYRIQAIDTFCDRNADEGRKHNDMAPNLQNLKCDYQSVWDVMRKSND
FRSGNSPPLPEDTNTSPNFIVVQPEGTLRIVLVLDTSGSMDGERFEKMIKGASNFIQSVV
PDDNYVGIVEFSSSSRVNSYMVQLISVSSRSELKSRLPGSVNGATCIGCGILEGIQVAQY
FGMDSRGAYLILLSDGLENREPNIADTLGDIESSGVIVHTIAIFLADTQMEELAQMTGGT
SYTCPDGGSAQCVISAFVSIIATRPQSIPDSAPIQVVSSSIVVDSGKIETTTIMIDAALG
LDTIMTFTWAANPIITVAVTGPDGSSLDSSDPEYDIDTSSKIITTTIGGAEAGLWDIEIS
NTGVNSFAEEVSINVISKPRSEDVYPPVVNSFLGAKIVNYTSFPLVEVYAHVHTNYQPVI
DATVIATVESTTSGNMTTIPLRDNGLGADLITGDGIYSAYFLDFSSNGRYGVKVDVNGKT
TSSSNVGLRSRRDTATFKGFQRTTTAGVFQVENYSPGLNVDILAPSKITDITSVERTYDE
NRNVTLIWTAVGDDLDQGTAASYELHFSDNYTQLRTDFTSTSAITDIDLIVGNLSQVTSS
GNPESISFLLPGEDSDAIFYFMIRAWDEAGNAGPLSNIVSVSRRRVPPTSMAPTSKSPAR
LNEAQQDRNQIILENGAFQNILIAIPKAIEEDSRIIENIKDIFTKGSSVLFSATNRRVYF
GSIKILVPHNWTRQVEYEIAQLEAYENANVIVTDQQSNHRPHVQNPIRCGREGQFIELSK
TFLIDPELRQNQFGDSGKVIARQFAKLRWGVFDEDYVPGTDADPYYPSNAVTASNGFEGT
RCSSEVRGDLLDENTGSPCQNDNKGNLPDSCRFVPSNVGQSARASLMFASNIHSIDTFCD
INADEGRKHNDMAPNLQNLKCDYQSVWEVMRKSNDFRSGNSPPLSEDTDTSPNFIVVQPE
GTLRIVLVLDTSGSMGGERFEKMIKGASNLIQSVVPDDNYVGIVEFSSSSTVNSYMVQLT
SVSSRSELESRLPGSANGNTCIGCGILEGIQVAQYDGMDSRGAYLILLSDGLENTEPNIA
DTLGDIESSGVIVHTIALFQADTQMEELAQMTGGTSYTCPDGGSAQCVISAFVSIIATRP
QSIPDSAPIQVVSSSIVVDSGKIETTTIMIDAALGLDTIMTFTWAANPIITVAVTGPDGT
SLDSSDPEYDIDTSSKIITTTIGGAEAGLWDIEISNTGVNSFAEEVSINVISKPRSEDVY
PPVVNSFLGAKIVNYTSFPLVEVYAHVHTNYQPVIDATVIATVESTTSGNMTTIPLRDNG
LGADLITGDGIYSAYFLDFSSNGRYGVKVDVNGKTTSSSNVGLRSKRDTATFQGFQRTTT
AGVFQVENYSPGLNVDILAPSKITDITSVERTYDENRNVTLIWTAVGDDLDQGTAASYEL
HFSDNFTQLRTDFTSTSAITDIDLIVGNLSQVASSGNLESISFLLPGEDSDAIFYFMIRA
WDEAGNAGPLSNIVSVSRRRVPPTSMAPTSKSPARLELYIIFIIAISCIVFLALLTFSIV
ITISLPRLHTVDDIGGHALSRDRAVFFLSAVAVVLGLVFASVCNLVVVGFYLHAESNHPP
DVTKRIPQSIQTRLSNISSSENIFNSAKPD
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgagccctatagaatttggagatcgatggtacagggcttattataggatacaggcgatt
gacacgttctgcgacagaaatgctgatgagggcaggaagcacaatgatatggctcctaat
ctgcagaatctgaaatgcgattatcagagcgtgtgggatgtgatgaggaaatcgaatgac
ttcaggtctggaaacagccctcccttgccagaggatacaaacacttcaccaaactttatt
gtggttcaaccagagggaactcttaggattgttcttgttttagatacaagtgggtctatg
gatggggagcgttttgaaaagatgatcaaaggggcctcaaacttcatccagagtgtagtg
cctgatgataattacgtgggcatcgtcgagttcagttcatcttccagagttaattcttac
atggttcaattaatcagtgtttcatcaaggtctgaattgaaatcacggctacctgggtct
gtcaatggcgctacgtgtattggatgcggaattctcgaggggattcaggttgctcaatac
ttcggaatggattcccgaggcgcctatctcatactcctcagcgacggattggaaaatagg
gaaccaaatatagcggacactctgggggatatcgaaagttcaggtgttattgtacacaca
attgccatctttctagctgatactcagatggaggaactggcccagatgacaggcggtaca
tcgtatacctgtcctgatggaggcagtgcacagtgtgtcatctctgcttttgtgtcaata
atagccacaaggcctcaaagtattcctgattctgcaccaatacaggttgtaagttcatcg
atcgtagtagactctggtaagatcgagaccaccacgatcatgatcgatgctgctctagga
ttggatactatcatgacattcacatgggcggctaaccccatcatcaccgttgcagtgaca
ggaccggacggatccagtttagacagcagcgatccagaatatgatatcgatacaagctcc
aaaataataaccaccacaatcggaggtgccgaggctggcttgtgggacattgaaatcagt
aacacaggcgttaacagttttgcagaagaagttagtataaacgtgatctccaaacctcga
tcggaagatgtttatcccccggttgtcaatagtttcttgggagcaaagatagtaaactac
acgtcatttcccctggtcgaggtctatgcccatgtccataccaactaccaaccggtgatc
gatgcgacggtgattgctacagtagaaagtacaacatcagggaatatgacaaccatccca
ctccgggataatggactaggagctgatttgatcactggtgacggtatttactcggcttat
ttcctggatttctcttcaaatggacgttatggcgttaaggtagatgtaaacggaaaaaca
acatcttcatcaaatgttggtctgagatcgagacgagatacagcaacgtttaaaggcttc
cagcgtacaactacggcgggtgtcttccaagtcgaaaactactccccgggtcttaatgtt
gatatcttggcaccatctaagatcactgacattacgagcgttgagagaacctacgatgag
aatagaaatgtaacattgatatggacagctgtaggggatgatttggaccaaggaacggct
gcctcttacgagctccatttctcagataactatacacaactccgaaccgactttacctct
acttctgccattaccgatatagatctcatagtcggtaacctctctcaagtcacttcttct
ggaaatcctgaatccatctcgtttcttctgccgggtgaagactcagatgctatcttttat
ttcatgataagagcctgggatgaggctggcaacgcgggtcctttatcgaatatagtatcc
gtctcaagacgccgtgtacctccgaccagcatggcgccgacttccaaatcaccagcaaga
ttaaacgaggcacaacaagatcggaatcaaatcattcttgaaaatggagcatttcaaaac
attcttatcgctatacccaaagcgatcgaagaagattcaagaatcattgaaaatatcaag
gacatcttcacaaaggggtcgtccgtcttattctctgccaccaatcggagagtctatttt
ggaagtataaagattctagtcccccataactggaccaggcaggtagaatatgagattgcc
cagctggaggcctatgagaatgctaacgtcatcgttacagatcaacagtctaatcatcgt
ccacacgttcagaacccaatccgttgtggccgagaaggacaatttatagaactatccaag
acattcctgatcgaccctgaactgcgtcaaaatcaatttggagattctggtaaggtaatt
gctcgtcagtttgccaaactccgctggggtgttttcgatgaagattacgtaccaggaacc
gatgctgacccttactacccatcaaacgctgtaacggctagtaatggatttgaaggaaca
agatgctcttcagaagttcgtggagatcttcttgatgagaatactggatcaccatgtcag
aacgataataaagggaatttacccgactcttgtagattcgtacctagcaatgtcgggcaa
tcagctcgggcatcgttgatgttcgcgtctaatatccactcgattgacacgttctgcgac
ataaatgctgatgagggcaggaagcacaatgatatggctcctaatctgcagaatctgaaa
tgcgattatcagagcgtgtgggaagtgatgaggaaatcgaatgacttcaggtctggaaac
agccctcccttgtcagaggatacagacacttcaccaaactttattgtggttcaaccagag
ggaactcttagaattgttcttgttttagataccagtgggtctatgggtggggagcgtttt
gaaaagatgatcaagggggcctcaaacctcatccagagtgtagtgcctgatgataattac
gtgggcatcgtcgagttcagttcatcttccacagttaattcttacatggttcaattaacc
agtgtttcatcaaggtctgaattggaatcacggctacctgggtctgccaatggcaatacg
tgtattggatgcggaattctcgaggggattcaggttgctcaatacgatggaatggattcc
cgaggcgcctatctcatactcctcagcgacggattggaaaatacggaaccaaatatagcg
gacactctgggggatatcgaaagttcaggtgttattgtacacacaattgccctctttcaa
gctgatactcagatggaggaactggcccagatgacaggcggtacatcgtatacctgtcct
gatggaggcagtgcacagtgtgtcatctctgcttttgtgtcaataatagccacaaggcct
caaagtattcctgattctgcaccaatacaggttgtaagttcatcgatcgtagtagactct
ggtaagatcgagaccaccacgatcatgatcgatgctgctctaggattggatactatcatg
acattcacatgggcggctaaccccatcatcaccgttgcagtgacaggaccggacggaacc
agtttagacagcagcgatccagaatatgatatcgatacaagctccaaaataataaccaca
acaatcggaggtgcagaggctggcttgtgggacattgaaatcagtaacacaggcgttaac
agttttgcagaagaagttagtataaacgtgatctccaaacctcgatcggaagatgtttat
cccccggttgtcaatagtttcttgggagcaaagatagtaaactacacgtcatttcccctg
gtcgaggtctatgcccatgtccataccaactaccaaccggtgatcgatgcgacggtgatt
gctacagtagagagtacaacatcagggaatatgacaaccatcccactccgggataatgga
ctaggagctgatttgatcactggtgacggtatttactcggcttatttcctggacttctct
tcaaatggacgttatggcgttaaggtagatgtaaacggaaaaacaacatcctcatcaaat
gttggtctgagatcgaaacgagatacagcaacgtttcaaggcttccagcgtacaactacg
gcgggtgtcttccaagtcgaaaactactccccgggtcttaatgttgatatcttggcacca
tctaagatcactgacattacgagcgttgagagaacctacgatgagaatagaaatgtaaca
ttgatatggacagctgtaggggatgatttggaccaaggaacggctgcctcttacgagctc
catttctcagataactttacccaactccgaaccgactttacctctacttctgccattacc
gatatagatctcatagtcggtaacctctctcaagtcgcttcttctggaaatcttgaatcc
atctcgtttcttctgccgggtgaagactcagatgctatcttttattttatgataagagcc
tgggatgaggctggcaacgcgggtcctttatcgaatatagtatccgtctcaaggcgccgt
gtacctccgaccagcatggcgccgacttccaaatcaccagcaagattagagttatatatc
atatttatcattgcaatttcctgtatcgtgttcttggctttactcactttttccatcgtc
attactatatcactacctcggcttcatacagtagatgacattggtggccatgcactttcc
agggatcgggcagtcttctttctttctgcagttgcagtagtccttggcttggtctttgct
agtgtctgtaatcttgttgttgtgggcttttatttacatgccgaatcgaatcatccgccg
gatgtcactaagagaataccgcagtccatccagacccgcctgtccaacatttccagtagc
gaaaacatattcaacagtgccaaaccagactag
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integrated database retrieval system
