Lytechinus variegatus (green sea urchin): 121406849
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Entry
121406849 CDS
T11173
Name
(RefSeq) calcium-activated chloride channel regulator 4A-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121406849
Ion channels [BR:
lvg04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
121406849
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GFIT
Motif
Pfam:
VWA
VWA_2
CLCA
VWA_CoxE
VWA_3
GBD_Hemicentin
MAGE_N
Motif
Other DBs
NCBI-GeneID:
121406849
NCBI-ProteinID:
XP_041453654
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Position
2:50307020..50342720
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AA seq
744 aa
AA seq
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MANNKQNFDFVDMLTIDIDTFCDIKADDEGRRHNKMAPNLQNRNCDGQSVWEVIRKSDDW
KEYGNRPPLPEDTETSPNFIVVQPGGILRVVLVLDTSGSMAGERFEKMIKGAKNFINSIV
PDNSYVGIVEFNFKSEVDSNMTKLTNATSRDEMNSRLPTLANGATCIGCGILGGIEVAQY
NGMDSRGTYLILLSDGEENEEPLIADTLDDIKNSSVIIHTIAFFEADTQMEELAQMTGGT
SYTCPDGGSAQCVISAFVSIIATRPQSIPDSAPIQVGSKTVKVDPGSTELTTIMIDASLG
LDTIMTFTWSANSIITISVTGPDGTSIDGSDPEYNLDISSKIITISIDVAEPGEWIIVIF
NNHNLVEEVSVDVNSKQRSKDVYPPVVSSFLGAKIVNYTSFPLVEVYAYVHTNYQPVIDA
TVIATVESTLTGNETVIPLQDNGVGADLITGDGIYSAYFLDFSSNGRYGVKVDVNGITTS
SSNNTLLRSKRAAGTPTTPRTPQGFQLTTTAGVFQVENYSPDLNVDILAPAKITDFSSVE
RTYDENRNVTLTWMAVGDDLDQGTAASYELRFSDNFTEIRTNFTVAPAIPDTDLIDGNLS
QVASSGNLESISFLLPGEDSDAIFYFMIRAWDEAGNAGPLSNIVSVSRRRLPPTTLPTTD
LSSEAASSPSSTGILTSKQISTQSPGNPEEPFPLWAIICIIFSVFGIILLITIPIIIRVV
CCRPKSKRVTGPHNDHMNPMYDGP
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaacaagcagaactttgacttcgtcgacatgttgacgattgatattgacacg
ttctgcgacataaaagcagatgatgaggggaggaggcacaataaaatggctcctaatcta
caaaatcggaactgcgacggacagagcgtttgggaagtaattaggaaatcggatgattgg
aaagagtatggaaaccgtcctccattgccagaggatacagagacttcaccaaactttatt
gtggttcaaccaggaggaattcttagggttgtactggtcttagataccagtgggtctatg
gctggagagcgttttgagaagatgatcaaaggggctaaaaacttcatcaacagtatagta
cctgacaatagttacgtgggcattgtcgagttcaatttcaaatccgaagtggattcgaat
atgactaaactcaccaatgctacatcgagggatgaaatgaactctcgactcccaacttta
gctaatggtgctacgtgtattggatgtggtattctaggaggcatcgaggttgcccaatac
aatggaatggattcccggggcacctatctcatactcctcagcgacggagaggaaaatgag
gaacccctcatagctgacaccctggatgacatcaagaattcaagtgttattatacacaca
atcgccttctttgaagccgatactcagatggaggagttggcccagatgacaggcggtaca
tcgtatacctgtcctgatggaggcagtgcacagtgtgtcatctctgcttttgtgtcaata
atagccacaaggcctcaaagtattcctgattctgcaccaatacaggttgggagtaaaaca
gtcaaagtagatcccggttcgactgagctcaccacgatcatgatagatgcttctctagga
ttggatactatcatgacattcacatggtcggctaactccatcataaccatttcagtgaca
gggccagacggaacaagtatagacggtagcgatccagaatataatctcgatataagttcg
aaaattatcaccatctccatcgatgtggcagagcctggtgaatggatcattgtaatcttt
aacaaccataatctcgtggaagaagtgagtgtggatgtgaattccaagcaacgctctaag
gatgtctatcctcctgttgttagcagcttcttaggagcaaagatagtaaactacacgtca
tttcccctggtagaagtctatgcatatgtccataccaactaccaacccgtgatcgatgcg
acggtgattgctacagtggagagcacgttaacgggcaatgagacagtcatcccactccaa
gacaacggagtgggagctgatttgatcactggtgacggcatttattcggcttatttcctg
gacttctcttcgaatgggcgatatggcgttaaggtagatgtaaacggaataacaacctct
tcatccaataatactttattgagatccaagagagccgcggggacaccaaccactccacga
acccctcaagggttccaacttaccactacggctggtgtcttccaagtcgagaactactcc
ccggatctgaacgttgacatcttggcaccagctaagatcactgactttagcagtgttgag
agaacttacgatgagaatagaaatgtcacattgacatggatggctgtaggggatgatttg
gaccaaggaacagctgcctcgtacgaactccgtttctccgataactttaccgaaatccgt
accaatttcaccgttgctcctgccattcccgatacagacctcatagatggtaacctctct
caagtcgcttcttctggaaatcttgaatcaatctcttttcttctgccgggtgaagactcg
gacgctatcttttatttcatgataagagcctgggatgaggctggcaacgcgggtccttta
tcgaatatagtatccgtctcaaggcgccgtctacctccgaccaccttaccgactaccgac
ctttcatcagaagcagcatcttcaccttcatccactggaatcttgacatcaaaacagata
tccacgcagtcacccggaaaccccgaagaaccgtttcctttatgggctattatatgtatt
atattttccgtcttcggaatcattcttttaatcaccattcccattatcatccgcgtggta
tgttgtaggccgaaatcaaagagggtaactgggcctcataatgatcacatgaatcctatg
tacgatggaccgtaa
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