Lytechinus variegatus (green sea urchin): 121406875
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Entry
121406875 CDS
T11173
Name
(RefSeq) rab GTPase-binding effector protein 1-like
KO
K12480
Rab GTPase-binding effector protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121406875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121406875
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121406875
Protein recycling
Rab4 associated proteins
121406875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab5-bind
Rabaptin
FYVE
FPP
betaPIX_CC
PspA_IM30
IBR
Motif
Other DBs
NCBI-GeneID:
121406875
NCBI-ProteinID:
XP_041453680
LinkDB
All DBs
Position
2:complement(57101840..57133163)
Genome browser
AA seq
997 aa
AA seq
DB search
MSSHDQNTFPARHMDIEGEVLSVQQRVGDLESSLQAVLQEKKLQEEDFAQKRAKFKELYL
SREQELIKEVDNVREEKDRLSEELAGLKAAASVIESSKDEEIAQIKQKWTDEVASLQQIV
SHTAAITAEETAMTYLMERDKLLALNEKLTQELQEISQNQGGEKTMTSSGSAGLLTSMTK
SFRSLTSATTSPSPTREEKLPLPQTPSSPSASDNLEQSMLKAQKDTELLRAVVVPLENEI
ESLKQKLSDVHSDNRLLQARLKKAIGSKDFSDAVPSADDCEVTKDDINILNEKIKDLNKV
LETEKAARTDLELYVAVLGKQKQVMQDEGDEMRTELKDVCCILEQEKQAHSQLQQTWQMA
NDQFLESQRLQMMDMRRMESVLTEEQQRQIAELLKKDQEREEQEKKVKVLKEKRENLEKR
HSKETAEQEVTQQASPAPVQTNSSSLLSRDDIEDSDDALLVPSSMDMPISSTPSRLHPSI
NFVSPNVDPEALLQFDTTDSASGAKSTVHGSLSEIGAQSGHNTSDLLGTSYDSVSLSSTI
SLTEAQERAISGTPESEEMKSVLASARSKTDLYSLLAGKRVVSDTEWTKIQEEIRFAREK
LGRPCDMCTNYEQQLQGLQTKYSESVESSRTLRQQLEQEIDNVLREQKIRSELEESLKNA
AEDAQIQIKTLTTKNGESEQLLSNIRHQYLKSQNELHSQMQILFESREQLYQEVTKLQKE
NDSLSAKRSLHQSLQSSEPFDLPTSPQELSRLCMKYRDDIITVRVNADHTESSLRSELSF
TREQLESEQHQRMTMEDTYQTELDDYKEELLVLRNLREDYEKEKKSRGEVEETLREVQES
KKSMQGKSKEVITALREQVEELSAHKTNLEAELQERRKKNQNLQSELENSEAVQKDFVKL
SQSLQVQLEVIRQKDNEVRWQHEDDADKCNNCKTVFGTSKKKKNHCKHCGKVFCPDCVTK
SVESGPRRRKMPVCDVCHTLLVNESAPYFSKEAPDNT
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcacgatcaaaatacttttccagctcgccacatggatatcgaaggggaagta
ctcagtgtccagcaaagggtaggtgatctggagtcttctctacaggctgtcctgcaagaa
aagaaacttcaagaggaagactttgctcaaaagagagcaaaattcaaagaactttacttg
tccagagaacaggaactaatcaaggaggttgataacgtccgagaggaaaaggatagattg
agtgaggaattggctgggctaaaggcagctgcatctgtcattgaaagcagcaaagatgag
gaaattgctcagatcaagcaaaagtggaccgatgaggtcgcatcactccaacaaattgtt
tctcacacggcagcaataactgcagaggagactgctatgacttatctgatggaaagagac
aaactccttgcacttaatgaaaaactcacacaggagctacaagaaatcagtcaaaatcaa
ggaggagaaaaaacaatgacatcgtcaggcagtgctggccttttgaccagtatgacgaaa
tcattccgcagcttgaccagcgccaccactagtccatctcctaccagggaagaaaagctc
cctctaccccagaccccaagctccccttcagcatcagacaatctggaacagagtatgtta
aaggcacagaaagataccgagctgcttcgagccgtggtagttcccctggaaaatgagatt
gaaagcctcaaacaaaaattatcagatgtacacagtgacaacaggcttctgcaagcgagg
ctaaagaaagctattggcagcaaagacttcagtgatgcagttccatcagccgatgactgt
gaagttaccaaggatgatattaatattctcaatgagaagatcaaggacttgaacaaggtg
ttagagacagagaaagctgcaaggacggatttagagctgtatgtcgctgtgcttggcaaa
cagaaacaagtcatgcaggatgaaggagatgagatgagaactgaactcaaagatgtgtgc
tgtattctagagcaagagaaacaagctcactctcagctccagcaaacctggcagatggcc
aacgatcagttcctagaatctcagaggttgcagatgatggacatgaggaggatggagagc
gtcctgacggaagaacagcagagacagatcgccgagctcctgaagaaggaccaggagcgt
gaggagcaggagaagaaggtcaaagtcctgaaggagaagcgagagaacctggagaaaaga
cattccaaggagacggcagagcaagaagttactcaacaagcatcgcctgcacctgtacaa
accaactcatcttcccttctgagtagagacgacatcgaggacagcgacgatgctctcctg
gtcccctcctccatggacatgcctatcagctccacaccttcaagactccatccatctatc
aactttgtcagccccaatgtcgacccagaagcgctgttacaatttgacactacagactcg
gcttcaggagccaagtcaacagttcatggcagcttatcagagattggagctcagagcgga
cacaatacgtctgatctcttgggcaccagttacgattctgtttcgctatcatccactatc
agtttaacagaggcacaagaaagagctatctcaggaactcctgaatcagaggagatgaag
agtgttttggccagtgctcgctctaagactgatctctactccctgctggcaggcaagaga
gtcgtcagtgatactgaatggacaaaaatacaggaagagattcggtttgctcgggagaag
ttaggaaggccatgtgacatgtgtaccaactatgaacagcagctgcagggccttcaaact
aaatactctgaatccgtggaaagttcaagaacacttagacagcaacttgagcaggagata
gacaatgtattaagagaacagaagatccgttcagagttggaggaaagcctgaagaatgct
gcagaagatgctcagatacagatcaaaacactcaccaccaagaacggagaatcagagcag
cttttatcaaatattagacaccaatatttaaaatcacaaaatgagttacattcccaaatg
caaattctatttgaatccagagaacaactttaccaagaagtcacaaagttacagaaagag
aatgacagtcttagtgccaaaaggtctttacatcaatctcttcagagcagcgaaccattt
gacttgccaacatcaccacaggagctttcccgtctgtgcatgaagtaccgtgatgacatc
atcacagtgcgagtgaatgccgaccatacggagagctcgctgaggagtgagcttagcttc
actagggagcagctggaatcagagcaacatcaacgcatgaccatggaggacacctatcag
actgagctagatgattacaaggaggaactacttgtattacggaacctaagagaagattat
gagaaagagaagaaaagtagaggtgaagtggaggagacattgagagaggtccaggaatca
aagaagtctatgcagggaaagtctaaagaggtcatcactgcactccgagagcaggttgaa
gaactatcagcacataagacaaatttagaagccgaattgcaagagaggaggaaaaagaat
cagaatctacaatcagagctagaaaactcagaggctgtgcagaaagactttgtcaaatta
tcacaatctctacaggttcagcttgaagtcataaggcagaaagacaatgaagtcaggtgg
cagcatgaggatgatgctgataagtgcaataattgtaagactgtctttggaactagtaaa
aagaaaaagaaccactgtaagcactgcggtaaggtgttctgcccggactgtgtgaccaag
tctgtggagagtggccctcgaaggagaaagatgcctgtttgtgatgtctgccatacacta
cttgtcaatgaatcagctccttattttagcaaagaagcaccagacaacacgtag
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