Lytechinus variegatus (green sea urchin): 121406907
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Entry
121406907 CDS
T11173
Name
(RefSeq) GATOR complex protein DEPDC5-like
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121406907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121406907
Membrane trafficking [BR:
lvg04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
121406907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IML1
DEPDC5_CTD
IML1_N
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
121406907
NCBI-ProteinID:
XP_041453714
LinkDB
All DBs
Position
2:complement(62851588..62884014)
Genome browser
AA seq
1625 aa
AA seq
DB search
MKNFKLWVHQKAFSENELLINPKEFPDVKIGDILEIYHPDEENSHLLLQVKSFKDELQPN
SKEIISVEQGVASLFQLRAYKNVKVTKVQSGDVALDLVELVFKDQYISRSDMWRLKNSLV
DSCIHMQQKLELSGIRAQVQELWSRWERVSCGAITNDTRVAFRSATAMVYLFIQMSSEMW
DFDTCGDLYWEKAVGGFLTDLFNKWKDKGVNNEVTVVLFSRTFFKAKSLAQFPKWMRDNV
KVDYVGRFYQDFYRAVVHHERRDEWHGLLQTLKAHFILYLKEVLCETQEGGSIPLGYNSS
AAEGNFLETLNMTLNVFDKHYVDRNFERTGQLVVLLTPGAGVFDVDREMCKITRQRMIDN
GIGSDLVCLAEQPLHAVPLFRFHNKTMDVGIHGGDYNIPHWLNYSFYTKEDAHGNSEKFK
PRIKLAERVYTSQAGNPLPTLVKECPQTMSRHALLRHISSDHSLSKQDDIDYQCEEYDDA
VFGFLSGKSPKPRTPATMRPSSGGQNRQRQTPSIGQLILDKEGSPQNKWTKADFKDPSRR
GSSPGTRHGSYHSDDGDVAIAIPGRGNKANPLARIQREAKVVSHSFEGRRRESSESHAAS
ISPKGVVVGSAGATTTTHINHTGQAQPKALVNPFGTSSLVVKLTSNRRRWTHTFPQGPSG
GAIQTHHRNQINPSYYFSHYYPSNSYTRHRNSSTLGSSPSSPHYPWAGPVINGGGSRTPT
DGNERPLLPHSSSENRLRPSASGSSLFSAGSSPSTDTVLQRPGSAGTRGLFDGPSSLDHA
MQHHPSLRRLNLLWSYTGDQEWTPYTLTGVDWKSLTATACLPISTDFYPDRLSLEKDFLE
FNYELLAEEDIIGPFMTVEAIFQELISQRLLQGFQLVVLPSLDLSSVIRSQRHPPLITNP
DKKEYVLSIGRIFHKLCLHSERKTISVTIYKPRHPSLCEPIQYTYQLWSVQNEGYSPIQT
TFRHEEIERYNWNYLDNYISSHDSEFSLVDSLKFWRSRFLLIPNTPVLVKRFADEHGISA
TEAASCEKDHAFRQYQTDAFLRFVEILNGIRRQTSTSRGPKASSGRQTPISGDLIHPGSR
SSPGPDRQRHTSGTGSPAPHPPNTPAATTITDEPLSLCTPLQVIAKAMADQSKGLRFIAP
GQKGIPPQLLHVRRGYDLGSKVVECNGQIMPRGCNMSENRLIQHASGFPHIPFIHGFYVY
CLVLPENVPPMTDATKSHSWCDYIPQLPVNTDFPSHWFEVAVMEELSWKQKSTETSSSVV
EDFHPVSPWAMREMSGGTPGFGSMPASSRAFKPPEIKNVMLEIDCNKTDRVEWCHVTYDG
QYTVDRAFDLQVEWLVCTPSLLNEMLQGWSRKANTFGFHLVPAPTDPFHQHPEFANPLRC
PLFIPLDIQSLKEDVHRRHAGGEEVLEADGIADGGCMLGLEPGNKAIDLFQELIMNKFGF
ILIRDKNQDTFDGFGFHASRRGRPMEYIHKSGVCFVSLINSPDDTPIVPSITPSGQGRSS
PCEVVKAPRRRKSSGGIPIMVGRDSSFDIVDTLDDDEPDVTFVEERRKMRSGSIREVREK
HMDGQFNNVGFLWSMNHTLTKRWRCSACGDEKVYDSIMKEVISISRNVDGKLTDFWLENT
ENLSF
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttcaagctttgggtccatcaaaaggcatttagtgagaatgaattactgatc
aaccccaaagagttccctgatgtaaagataggtgacatcttggaaatatatcatccagac
gaagagaatagtcatctgcttttacaagtcaaatccttcaaagatgagcttcaaccgaac
agtaaagaaataataagtgtggaacaaggagtggcatcgctgtttcagctgagggcttac
aagaatgtgaaggtcaccaaggtccagtcaggagatgtagcgctagacctggtggaattg
gtcttcaaggaccagtacatcagcaggagtgacatgtggagactcaagaacagtctggtg
gacagctgtattcacatgcaacaaaagttggagctgagtggaatacgtgctcaggtccag
gaactttggtcacgttgggagagggtgtcatgtggagccatcaccaatgatacaagagtt
gcctttagatcagctacagccatggtgtatctcttcattcagatgagttcagagatgtgg
gactttgatacatgtggagatctgtattgggaaaaggctgtaggtggattcctgactgac
ctcttcaacaaatggaaggataaaggagtcaacaatgaggttactgtggttctcttctct
cgtacattcttcaaagcaaaatcacttgcccagtttcccaagtggatgagagacaatgtt
aaagtggactacgttggccggttctaccaggatttctaccgtgccgttgtccatcatgag
agacgagatgaatggcatggtctactccagaccctcaaggctcactttatcctctacctg
aaagaagtcttatgtgaaacccaagaaggtggatcaatacctttggggtataattcatca
gctgctgaggggaacttcttggaaactctaaacatgactctcaatgtgtttgacaagcac
tacgttgaccgtaactttgagcggacgggacagcttgtggtgttattaacaccgggagct
ggagtgtttgatgtcgacagggaaatgtgcaagatcaccagacagagaatgatcgataac
ggtattggcagtgatctggtatgtctcgctgagcagcctctccatgcagtgcctctgttt
aggttccataataaaaccatggatgtgggtatccatggaggtgattataacatccctcat
tggctcaactacagcttctacaccaaagaagatgcacatggaaatagtgagaaatttaaa
ccaaggatcaagctagcagagagggtttacacgtctcaagctggaaacccccttcctaca
ctggtcaaggaatgtccgcagaccatgagcagacatgccctgttacgtcacatctcgtcg
gaccactccctttccaagcaggacgatattgattaccagtgcgaggagtatgatgatgca
gtctttggtttcctcagcggcaagtcgcccaaaccaaggacacctgcaacaatgcgtcca
tcatcaggaggtcagaatcgtcaacggcaaactccatcaattggtcagttaattctagac
aaagaaggatcaccccagaacaaatggaccaaggcagacttcaaagatccaagtaggagg
ggtagctctccaggaaccaggcatggaagctaccattcagatgatggggatgttgcaata
gccattccagggaggggcaataaagccaatcctcttgccagaatacaaagagaagccaaa
gttgttagccatagttttgaaggaagacgtagagagtcttcagagagccatgcggcttcc
atctctcctaaaggtgttgtcgtgggcagtgctggggctactaccaccacccatatcaac
cacaccggtcaggctcagccaaaggcattggtcaatccattcgggacatcaagtttagtg
gtcaaattgacctctaatagacgaagatggacacacaccttccctcagggcccaagtggg
ggcgccatacaaacccaccatcgtaaccagatcaacccgtcctactacttctcccattac
tatccatccaactcatacacccgccaccgaaactccagcacccttggctcctccccttcc
agcccccattacccctgggctggtcctgtcatcaatggcggtgggtcacgtacccctacc
gatggtaacgagagaccgttgttaccccatagttccagtgagaatcgactgcgcccatca
gccagtgggagcagcctcttcagcgctggttcatctccgagtacggataccgtgttgcag
aggccaggtagtgcaggcacccgaggtctgtttgatggaccgagctccttggatcacgcc
atgcagcatcatccttccctaagaagactcaacttactatggagttatacaggggatcaa
gaatggaccccttacaccctgacaggtgttgactggaagtccttgactgccacagcctgt
ctgcccatatcaactgatttctatcctgacaggttgtcattggaaaaggacttcctggag
ttcaactatgaactcttagcggaggaggacatcattggtccttttatgacagtggaagcc
atcttccaggagctcatatcgcaaaggcttctgcaaggttttcagttggttgtacttcca
agcctagatttgtcatctgttatccggagtcaacgtcatcctccattgatcactaaccca
gataagaaggagtatgttttgagtattggtcgtatcttccacaagctatgccttcattct
gaaaggaagacaatatcagtcaccatctataaaccaaggcatccatcactgtgtgaaccc
atccagtatacctatcagctatggtctgtacagaacgaaggttattcgccgattcaaacc
actttcagacatgaagagattgagagatacaactggaactatcttgataactacatctca
tcacatgatagtgaattctcattggtagattcactgaaattctggagaagccggtttttg
ctgatccccaacactcctgtgctggtgaagcgatttgcagatgagcacgggatcagcgca
actgaggcagcatcgtgcgagaaggaccatgccttcaggcaataccagaccgatgcgttc
ttgagatttgtagagatcttgaatgggatccgcagacagacaagtacgtccagaggtcca
aaggcatcatctggacggcagactcccatctcaggtgacctgatacaccctgggagtaga
tcctctcctggaccggatagacagaggcacaccagtgggaccggtagtcctgctccccat
cctcctaatacacctgctgctactactataactgatgaaccactttcactctgcacacca
ttgcaagtcattgctaaagctatggctgatcaaagtaaagggttgaggttcatcgcccct
ggacagaaggggattcccccccaattgcttcatgtcaggcgaggctatgacctgggttca
aaggtcgttgaatgcaacggtcagatcatgccaagaggatgcaatatgtcagagaatcgg
ttgatccagcatgcgtcaggcttccctcacattcccttcatccacggtttctacgtttac
tgcttggtgcttccggagaatgtacctcccatgactgatgcaaccaaatcgcattcatgg
tgtgattacatcccccagcttccagtcaacacagacttccctagtcactggttcgaggtt
gccgtgatggaagagttgtcatggaaacagaaatctactgaaacgagttccagtgttgtc
gaggacttccaccctgtatcaccttgggccatgcgtgagatgtcaggaggtacacctggc
tttggatctatgcctgctagtagcagagctttcaagccgccagagatcaagaacgttatg
ctggagattgactgcaataagactgatcgtgtggagtggtgtcatgtgacgtacgatggc
caatacacagtcgatagggcatttgacctccaggtcgagtggctagtctgtacacccagc
ctcttgaatgaaatgctccaaggatggtcaagaaaagccaacacctttgggttccacctg
gtccccgcccccactgaccccttccaccagcatcctgagtttgccaaccccctacgatgc
cccctcttcatacccctggacatccagtccttgaaggaggacgttcacaggaggcacgcg
ggcggggaggaggtcctcgaggcggatgggattgccgacggtggatgcatgcttggtctg
gagcctggtaacaaggctattgatctcttccaagagctcatcatgaacaagtttggtttc
atcttaatccgagataagaaccaggatacgttcgatggctttggttttcatgccagtagg
cgtggtcgcccgatggaatacatccacaaatcaggggtgtgtttcgtttccctcatcaac
tctccagacgacactcccatcgtcccaagcattaccccgtccggccagggtcgaagctct
ccctgcgaggtcgtaaaggctcctcgacggaggaagtctagcggcggtatccccatcatg
gtcgggcgcgatagcagcttcgacatcgtcgataccttggatgatgatgaacccgacgtg
acttttgtggaggagaggaggaagatgcggagcggaagcatcagggaagttcgtgagaag
cacatggatgggcagttcaataacgttgggtttctgtggtccatgaaccatacgctgacc
aagagatggcgctgcagtgcttgcggcgatgagaaggtgtatgatagtatcatgaaagag
gtcattagtataagtcgcaatgtggatggcaagctgactgatttctggcttgagaataca
gagaacctgtcattttga
DBGET
integrated database retrieval system
