Lytechinus variegatus (green sea urchin): 121406998
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Entry
121406998 CDS
T11173
Name
(RefSeq) RING finger and SPRY domain-containing protein 1-like
KO
K23332
RING finger and SPRY domain-containing protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121406998
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121406998
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121406998
NCBI-ProteinID:
XP_041453816
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Position
2:301636..333030
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AA seq
639 aa
AA seq
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MIVSAWYSYLVLRETLVRKWPVVYRFLRYCINTMGNSCISKDHRRRTLEHGGTTDGGNGS
SSGGGGGGGGHYSDYPSSHSTPTNHNSDQSGQSLNENRQVRAQVTPLYMLASRDMAAAQP
SFTSDISHVHSSDDEEMEHVNQLMLRTLQVIRTLVDNEQEPPYAMLRLHEIAETESGWSK
VVQAMIRVIPMDDPLGPAVITLLIDECPLPTMETVKRLYRALGISAHLAEEAKLKPQRHR
NIAAVLGCIAEKLAGPNSVSLLVPEIIEYLLSLLVGNVHPQITLYALIALEKFSQTSENK
LTIKKAGIAEKLVPLVQWAESSDLDHRQVGFCARWCLDNVFFVPGRSLTYEIINLEGLNA
MLNDNDVSEYLKISPNGLEARSDVLSFESVRCTFCVDEGVWYYEVRVITNGVMQIGWATK
NSKFLNHEGFGIGDDEFSFSYDGCRQLYWYNAKSRTHRHPPWKSGDVVGFLLDLDKKYMA
FSLNGNILPPECEVFKSAQTGFFAAASFMSFQQCEFNFGMTPFKYPPAGPFKTFNEYAKL
TPEEKQILPRHKKMELIHQMSISDSACSLCFDKEATVTFKPCGHGGFCPSCAIQLEQCPL
CRTTIVQRLCNDDSTIGVEPGSSSNPNNNAAASLETEDS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgattgtctccgcttggtactcctatcttgtgttgcgagagacgcttgtacggaagtgg
ccggtggtttaccgttttctcaggtattgcatcaataccatgggaaactcatgtatcagt
aaggaccacagacgaagaactctggagcatggaggcaccacggatgggggaaatggcagc
agtagtggtggaggtggtggtggtggtggacattattctgattatccctcctcacatagc
acaccaacaaatcacaactcagatcagtcaggacagtccctgaatgagaacagacaggtt
cgagctcaggtcacccctttgtacatgctggcttccagggacatggctgccgctcaacct
agctttacctcagacatttcgcatgtgcacagtagtgatgatgaggaaatggagcatgtg
aatcaactcatgcttaggacgttgcaagtcattagaactcttgtggataatgaacaagag
ccaccatatgccatgctgagattacatgaaatagctgaaactgaaagtggatggtcgaag
gttgtccaagcaatgattagagtgatccccatggatgacccccttggacctgctgtaatc
acccttcttatagatgaatgccctcttccaaccatggaaacagttaagagattatacaga
gcccttggaatatccgcccatctagcagaggaggcaaagttaaaacctcagcgacatcgg
aacatagcagccgtcctgggctgcattgctgagaaactagctggtccaaatagtgtgtcc
cttcttgtgccagaaatcattgagtacttgcttagtttactggttggcaatgtacatcca
caaataacattgtatgccctaattgccctagagaagttttcacaaacgagtgaaaataag
cttaccatcaagaaggctggtattgctgagaagctcgtaccccttgttcagtgggctgag
agttcagatctagaccacagacaagttggattctgtgcaagatggtgccttgataatgtc
ttctttgtaccaggaagatcactgacctatgaaataatcaatcttgagggactcaatgca
atgctgaatgacaatgatgtcagcgagtacttgaaaatatctcctaatggcctcgaggca
aggagcgatgttttatcatttgagagtgtccgttgtacattttgtgttgatgaaggtgtc
tggtattacgaggttagagtcattaccaatggtgtcatgcagataggttgggcaactaaa
aacagtaaatttctcaatcacgaaggatttggtataggtgatgatgagttctctttctct
tatgatggatgcaggcagctctattggtataatgctaagagcagaacgcatagacatcca
ccttggaaatcaggtgatgttgtaggttttctattagaccttgataagaagtacatggct
ttctcactcaatggcaacatccttcctcctgaatgtgaagttttcaaatcagctcagaca
gggttttttgctgccgctagtttcatgtccttccaacaatgtgagttcaactttgggatg
acccccttcaagtatcctccagctggtccatttaaaacattcaatgaatatgccaagctc
actcctgaagaaaaacagatacttccaaggcataaaaagatggagttaattcaccaaatg
agtatcagtgattctgcgtgcagcttgtgctttgacaaagaggcaactgtaacattcaaa
ccatgtggacacggtggcttctgcccatcctgtgcaatacagctagaacagtgcccgctg
tgtcgtactaccatagtgcaacgcctctgcaatgatgattccacgataggcgtggaaccg
ggctcttccagcaacccaaacaacaatgcagcagcatccttagagacagaggattcatga
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