Lytechinus variegatus (green sea urchin): 121407085
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Entry
121407085 CDS
T11173
Name
(RefSeq) rhodopsin, G0-coupled-like
KO
K04253
visual pigment-like receptor peropsin
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lvg04030
]
121407085
G protein-coupled receptors [BR:
lvg04030
]
Rhodopsin family
Vision
Opsin
121407085
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
121407085
NCBI-ProteinID:
XP_041453946
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Position
2:complement(3496185..3518044)
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AA seq
495 aa
AA seq
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MATTTESYHSGTEALSNLQPEYMTPLSKTGYLLTGIYLTIVGTIATIGNITVICVLFRYG
TFRKRSINLLLINMAASDLGVSVTGYPLTTLSGYWGRWLFGDVGCKFYAFCVYTLSCSTI
TTHAVIAFYRYIYIVKTDLRPKLTANFTSIVIIFIWVYALFWTLTPFVGWSSYVYEPFGT
SCSINWFGRSFNDISYMVACVIGVYLVQIIVMVYCYHHVAKKIRGIDPERTQGKDSGVNV
FRKLRRREAKIDTHVTKMCFMMMISFIIVWTPYAVESLRVAHVHRISAFSAVIPTMFAKS
SCMLNPIIFLSSSSKFRRDLRKMWSSPPSHESLRQEERNKTQPSLYVRHSDISSVYRNNT
ASVYYDKERIYIGEMRATSIQKEAELMRRDPEVLSIASSTSSDVHFVVRDSKRPKRALGP
RGPEMFTASGYTNHASSTSDSAGQSTSSGTKRTGFGSRKASRQYSVKSQSEETANSGEIF
TLDGSGLEMMSLRRL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacgacggagtcatatcactccggaacagaagccctttccaatctccagcca
gagtacatgacccctctgtctaagaccggatacctactaaccggtatctaccttacaatt
gtcggtacgatcgcgacgattggcaatatcacggtgatctgtgtgctgttccgttatggg
acctttcggaagcggtccatcaatcttctcctaataaacatggcggccagtgacttgggc
gtatctgtgaccggctaccctcttacaacgttatcggggtactggggacgatggctcttc
ggggatgttggttgcaagttctacgcattttgcgtctatacactttcttgtagtaccatc
acaacgcatgcagtcattgcattttaccgatacatctatattgtgaagactgacctcaga
ccgaaattgactgcgaatttcacgtccattgtcatcatctttatatgggtatatgcctta
ttctggactttgactccctttgtcggctggagcagttacgtctacgagcccttcggtact
tcttgttctatcaactggtttggacgatcattcaatgatatctcctacatggtggcctgt
gttatcggcgtctatcttgtccagattatcgtcatggtctactgttaccaccacgtggct
aaaaaaatcagaggaatagacccagaacgaacccagggaaaagattcaggtgtcaacgtc
ttcaggaaactccgaagaagagaagcaaagatagacacacatgtcacaaagatgtgtttc
atgatgatgataagcttcataatagtctggactccttacgcagttgagagtctgagggtg
gctcacgtgcatcgcatcagtgctttttcagctgtcatcccaacaatgttcgcgaaaagt
tcttgcatgcttaaccccatcatatttttgtcatcgagctccaagttccgacgggatctg
cgcaagatgtggagttcccctccgtcccacgaatcgcttcgccaggaagaacgcaacaag
acgcaaccctcgctctatgtccgacatagcgatatatcctcggtataccgaaacaacact
gcttccgtgtactatgacaaagagcgaatctacatcggtgaaatgcgcgccaccagtata
cagaaggaagctgaactcatgcgacgcgacccggaagtgctctcgattgcgtcatcgaca
agttctgacgtccattttgtggtgagggattcgaagaggcccaaaagggccctgggaccg
cgtggccctgaaatgtttacagcttctgggtacaccaaccacgcgagttcaacgagtgat
agtgctggacagtcgacgtcgtctggcacaaagaggactggttttggaagtcgtaaagcg
tcaagacaatattccgtaaagtcccagtcggaagaaactgcaaattcgggagaaatattt
actcttgacggtagtggtttggaaatgatgagcttacgaaggctttaa
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