Lytechinus variegatus (green sea urchin): 121407139
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Entry
121407139 CDS
T11173
Name
(RefSeq) phenylalanine--tRNA ligase, mitochondrial-like isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121407139
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lvg01007
]
121407139
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvg03016
]
121407139
Enzymes [BR:
lvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
121407139
Amino acid related enzymes [BR:
lvg01007
]
Aminoacyl-tRNA synthetase
Class II (U)
121407139
Transfer RNA biogenesis [BR:
lvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121407139
Prokaryotic type
121407139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
tRNA-synt_2
PBECR5
Motif
Other DBs
NCBI-GeneID:
121407139
NCBI-ProteinID:
XP_041454009
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All DBs
Position
2:complement(5442170..5457872)
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AA seq
463 aa
AA seq
DB search
MLPNPNEFYAMASRTLICAVRTLHSKLTLHRSYKRCLVGNLSSTSHYSTKSNFTQTKPKD
SEVTIQDRTFTRDAFTTITPKIISRVGTNLHNKPHHPLCIIKEKIRDHFYSSFLNRRGNP
LFSIYDNLSPIVTLQQNFDSVLVPKDHISRKKGDNYYINEEFMLRAHTSAHQHELVNAGL
DAFLVVGDVYRRDEIDTSHYPVFHQMEGVKLFTQHELFANCNDATNLSLFETRPTTRSPD
RQECHTLEAAKLVEFELKNVITSMAEMLFGKDIECRWIETDFPFTHPSWELEIFFQGDWL
EVLGCGIMEQKLLQSAGAGTSIGYAFGLGLERLAMILFDIPDIRLFWSTDNRFLDQFRDQ
DINQVKFKPFSKYPPVIQDMSFWCPECDYESNDFYDLVRNVGGELVEQVAMIDEFTHPKT
LRTSHCYRITYRSMERTLVREEVNQIHDLIKETAEKQLRVEPR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctccccaatccgaatgaattttatgcgatggcttcgagaactttgatttgtgctgtc
aggacattgcattctaaactaacactgcatcgatcatacaaaaggtgccttgtgggaaat
ctgtcatccacaagccattattcaacaaaatcaaatttcacccagacaaaaccaaaagac
tccgaggtcactattcaagacagaacattcacccgagatgccttcacgaccatcacgcca
aagatcatctcccgggtcggtaccaacctgcacaataaaccccaccatccactctgcatc
atcaaggagaaaatccgcgaccacttttacagtagcttcctcaatcgtcgtggcaaccca
ctattctccatctatgacaacctaagccccattgtaaccttacagcagaactttgacagc
gtgctggtcccaaaggatcacatatcgaggaagaaaggggacaattactacatcaatgag
gagtttatgttgagggcgcatacatcggctcatcagcatgagctggtcaatgcagggctg
gatgcattcctggtggttggcgatgtctatcgtagggatgagatcgataccagtcattat
cctgtctttcatcaaatggagggagtgaagctctttacgcagcatgagctgtttgcaaat
tgcaacgatgccaccaatctgagtttgtttgagaccaggcctacgactagatcccctgac
aggcaagagtgccacaccttggaggctgccaagctggtggagtttgaacttaagaatgta
atcacctccatggctgagatgctctttgggaaggacattgaatgtcgatggattgagaca
gatttccctttcactcacccttcctgggagttggagatcttctttcaaggagattggttg
gaggtgctaggatgtggtatcatggaacaaaagctattacagtcagctggtgctggaact
tctataggctatgccttcggtcttggactagaacgccttgcaatgatcttgtttgacatt
ccagacatcagactattctggagcacagacaatcggtttctggaccaattcagggaccaa
gacataaatcaggtcaaattcaagccattcagcaaatatccacctgtcatccaagatatg
tcgttctggtgtcctgaatgtgactacgaatcaaatgacttctatgatctagtacgaaat
gtagggggagagctggtagaacaggttgccatgattgacgagttcacgcacccaaagact
ctgagaaccagccattgttacaggataacgtataggagtatggaaagaacacttgttcga
gaggaggttaatcaaattcatgacttgatcaaagaaactgcagaaaaacagctgagagtg
gagccaagatga
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