Lytechinus variegatus (green sea urchin): 121407316
Help
Entry
121407316 CDS
T11173
Name
(RefSeq) calnexin-like
KO
K08054
calnexin
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04141
Protein processing in endoplasmic reticulum
lvg04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121407316
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121407316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lvg03110
]
121407316
04131 Membrane trafficking [BR:
lvg04131
]
121407316
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lvg04091
]
121407316
Chaperones and folding catalysts [BR:
lvg03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
121407316
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
121407316
Autophagy
ER-phagy
Other ER-phagy associated proteins
121407316
Lectins [BR:
lvg04091
]
L-type lectins
121407316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calreticulin
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
121407316
NCBI-ProteinID:
XP_041454262
LinkDB
All DBs
Position
1:complement(16452206..16471025)
Genome browser
AA seq
598 aa
AA seq
DB search
MKLNFILLSLLLLGSLTVIHCQDDVDEEDYDDEEDMDVDVEEEEEVAPIEQVDYSPPEPS
GPHHFAEPFDSADVLGSKWVPSKAKKDGVDEDISKYDGKWAIEEAETSPLAGDMGLVLKS
RAKHHAISAKLNKPFVFDNEPFIVQYEVKFQNSHDCGGAYVKLLTDSPDLSLDAVFDKTP
YTIMFGPDKCGADSKLHFIFRHKNPNTGEFEEKHAKKPSGAFSHVFTDKKVHLYTLVINT
DNTFQILVDQKVVNSGSLLADMSPPVNPPAEIEDPDDKKPSDWDDRKKIPEPGAEKPDDW
DEDEPKEIIDETAVQPDGWLEDEPELIDDPDAEKPDDWDDEMDGEWEPPKMNNPLCEDVG
CGEWKPPMVANPAYKGKWKAPYIDNPNYQGEWKPKMIPNPDFFEDLEPFKMTPIGAAALE
LWSMSDNILFDNFIITTDREVADQYAADSFSLKQREGVVASAESFVAGLIDAATERPWLW
AVFALVVIIPLFFCIRFCFKSSPEELDSKKSDEATPDDEKEGGDEDEKDGEKVEEDGEKV
EEEEVSAEGDAVVRQRKKTTKADLEGPSEEADEAPEEESAPKEKSSTPKKPKTRSRKE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaatttcatccttttgtctctcctccttcttggatctctcactgttatccat
tgccaagatgatgtagatgaagaggattatgatgacgaagaggacatggatgttgatgtg
gaggaagaggaagaagtagcacctatagaacaggtggattattcaccacccgaaccatca
ggaccacatcactttgctgaaccatttgatagtgcagatgttcttggctcaaagtgggtt
ccgtccaaagcaaagaaggatggcgtcgatgaagatatctcaaagtatgatgggaaatgg
gccattgaagaagcagaaacatctccgcttgctggtgacatgggacttgtattaaagtcg
agagccaaacatcatgccatttctgccaagttgaacaagccttttgtttttgataatgag
ccattcatagtccaatatgaagtcaagttccagaactctcatgattgtggtggtgcttat
gtaaagctcttgactgattcaccagatttatccttggatgctgtatttgataagacacca
tacaccattatgttcggacctgataaatgtggagcagactctaagctacatttcatcttc
aggcacaaaaaccccaatactggtgaatttgaggagaaacatgccaagaagccaagtggg
gcattcagccatgtgttcactgataagaaggtccatctctataccttagtgatcaacaca
gacaataccttccaaattcttgttgatcagaaggtcgtcaactctggcagtctgcttgca
gacatgagtccaccagtaaatccacctgctgagattgaggatccagatgacaagaaacca
tcagactgggatgacagaaagaagatcccagagcctggtgcagagaagcctgatgattgg
gatgaagatgagcctaaagagatcattgatgagactgcagtacaacctgatggatggctt
gaagatgagccagaactcattgatgatccagatgcagagaaacctgatgactgggatgat
gagatggatggagaatgggaaccacctaagatgaacaacccactttgtgaagatgttgga
tgtggtgaatggaagcctccaatggtagcaaacccagcatataagggtaaatggaaggca
ccttacattgataatcctaactaccaaggagaatggaaaccaaagatgatccctaatcct
gatttcttcgaggacttagaaccatttaaaatgacacctattggagctgctgcactagaa
ctatggtcaatgagtgataacatcctgtttgataatttcatcatcaccacggatcgagag
gttgctgaccagtatgctgctgatagtttcagtctaaagcagagggaaggagtcgttgct
tcagctgaatcatttgtagcaggtttaattgatgcagccacagaacgaccatggttatgg
gccgtctttgctctcgtcgtcatcatccctctcttcttctgtataagattctgcttcaaa
tcgagcccagaggagcttgacagtaagaagagtgatgaagctacaccagatgatgagaaa
gaaggaggagatgaagatgaaaaagatggagagaaggtagaagaagatggagagaaggta
gaagaagaggaagtatcagcggaaggtgatgctgtagttagacaacgaaagaagactacc
aaagcagacctagaaggtccatcagaagaggctgatgaagctcctgaagaagaatcagca
ccaaaagaaaaatccagcacaccgaaaaaacccaaaacacgctcaagaaaggaatga
DBGET
integrated database retrieval system
