Lytechinus variegatus (green sea urchin): 121407360
Help
Entry
121407360 CDS
T11173
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lvg03041
]
121407360
03016 Transfer RNA biogenesis [BR:
lvg03016
]
121407360
Enzymes [BR:
lvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121407360
Spliceosome [BR:
lvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121407360
Transfer RNA biogenesis [BR:
lvg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
121407360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
DEAD
Motif
Other DBs
NCBI-GeneID:
121407360
NCBI-ProteinID:
XP_041454339
LinkDB
All DBs
Position
2:complement(12903559..12929589)
Genome browser
AA seq
374 aa
AA seq
DB search
MTAFAEFGCLPEITQAVDEMGWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPV
IQIVHETLRDKAEGKTKESTASVSMDSSSWKMNVYDRGDAMAIDKEGLLCQSREMQSWHG
TRANKGVSGKGKYYYEAEVTDEGLCRVGWATDKADLNLGTDKQGFGFGGTGKKSFGRQFD
TYGESFGKDDIIGCYLDLDSGEIYFSKNGKDLGLAFSIPGHLLKSTYYPTVVLKNAEMKF
NFGLTPFKNSPFKGYSAICEAPSNCVVKSPNMGGGLAGPAKAAPNAPQAIIIEPSRELAE
QTLNQIRLFKKHLTTHCPRELLIIGGQAAKEQVDALFKGIDIVVATPGRLEDLMSTGKLL
LSQVGLSFIIQVFI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctttgcagaatttggttgtctccctgagattactcaggctgtggatgaaatg
ggatggctgttgccaactgatgttcaggctgaagccattcctctcatcctcgggggtgga
gatgttcttatggctgcagaaactggaagtggaaaaactggggcgttctgtctaccagtt
atccaaattgtccatgaaacactgagagacaaggcagaaggaaagacaaaggaatctact
gcttctgttagcatggattccagctcttggaagatgaatgtttatgacagaggagatgcg
atggctattgataaagaaggtctgctgtgtcaaagtcgagagatgcaatcatggcatggc
accagggcaaataagggtgtcagtggtaaaggaaagtactattatgaggctgaagttaca
gatgaaggactttgccgagttggatgggctaccgacaaagctgacttgaatcttggaact
gacaagcagggttttggattcggtggaacaggcaagaaatcatttggacgacagtttgat
acctacggagagtcatttggaaaggatgacatcattggttgttacttggatctagatagc
ggagaaatctacttctctaaaaatggcaaagaccttggcttggcattctctatacctggt
catcttctcaagtctacctattaccccacagttgtcctcaagaatgctgagatgaaattc
aactttggtctcactcctttcaagaattcaccatttaaagggtacagtgctatctgtgaa
gcgccttcaaactgtgttgtcaaatctccaaacatgggtggtgggcttgctggccctgca
aaagcagcacccaacgctcctcaggcaatcatcatcgaaccatcacgagaacttgctgaa
cagactttgaaccagataagactcttcaaaaaacaccttacaacgcactgcccaagagaa
ttgttgatcattggaggacaagcagccaaggaacaagtagacgcgctctttaaaggaatt
gatattgttgtagccacaccaggacgtttagaagatctgatgagtactggaaaactctta
ctgtcacaggtagggttatcattcattatacaggtatttatataa
DBGET
integrated database retrieval system
