Lytechinus variegatus (green sea urchin): 121407367
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Entry
121407367 CDS
T11173
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03020
RNA polymerase
lvg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121407367
09124 Replication and repair
03420 Nucleotide excision repair
121407367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121407367
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121407367
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121407367
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121407367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
121407367
NCBI-ProteinID:
XP_041454347
LinkDB
All DBs
Position
2:complement(13077937..13093723)
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AA seq
300 aa
AA seq
DB search
MYSIIFIPRTDNQISDKILQNLSSIMPYANQPTIQLTELTDDNVKFIIEDTDLSVANSIR
RTILAEVPTIAIDWVEIQANSSVLHDEFISHRVGLIPLTSDEVVDKLNFNRDCGCEEFCS
ECSVELSLDVKCTDDQTRHVTSRDLLSSNQKVVPVPSRNQESSDYGEVDDILIVKLRKGQ
ELRLRAYAKKGFGKDHAKWIPTAAIAFEYDPDNVMRHTVYPKPDEWPKSEFTEVDEDTPQ
GKFDGDAVPNKFFFNVESIGALTPENIVFSGLSVLKKKLSDLQTQHSHEAQAQAEGLAIN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtactcaatcatttttattccgaggaccgacaatcaaatttctgataaaatcttacag
aatttgtccagcattatgccttatgccaaccaaccaacgatacagttaacggagctgact
gatgacaatgtgaagttcataatcgaagacacagatcttagtgttgcgaacagtatcagg
aggactatcctggcagaggttcctacaatagcaattgactgggtagaaattcaggccaac
agttcagtccttcatgatgaatttatttctcatagagttggtctcattccactcacaagt
gatgaagtagttgacaaacttaacttcaacagggactgtggatgtgaggagttttgttca
gaatgctcagtggagctgtcattggacgtgaagtgtacagatgatcagacacgtcatgta
acctccagggatctactctcaagtaatcagaaagtcgtcccggttccatcaagaaatcaa
gagtcaagtgactatggtgaagtagacgatattcttattgtaaaactgaggaaaggccaa
gagcttaggttacgagcgtatgccaagaaaggttttggtaaagaccatgccaaatggatc
cccactgcagccatcgcatttgaatacgacccagacaacgtgatgaggcatacagtgtac
ccaaaaccagatgagtggcctaagagtgaattcacagaagtagatgaagacacaccacag
ggcaagtttgatggtgatgcagttcctaacaagttcttcttcaacgtggagtctattggt
gctttaacacctgaaaatattgttttctctgggttatctgttctgaaaaagaaattgagt
gatctgcagacccagcatagccacgaagcccaggcacaggccgagggactagccattaat
tga
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