Lytechinus variegatus (green sea urchin): 121407393
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Entry
121407393 CDS
T11173
Name
(RefSeq) insulin-like growth factor-binding protein complex acid labile subunit
KO
K05401
toll-like receptor 3
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121407393
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lvg04054
]
121407393
04090 CD molecules [BR:
lvg04090
]
121407393
Pattern recognition receptors [BR:
lvg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121407393
CD molecules [BR:
lvg04090
]
Proteins
121407393
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
TIR
TIR_2
DHU1_N
Motif
Other DBs
NCBI-GeneID:
121407393
NCBI-ProteinID:
XP_041454381
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All DBs
Position
2:14271018..14274190
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AA seq
747 aa
AA seq
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MFSSNSLSLLNAASSNLETFPGDVVELLTSSTILSLSSNRIRNINWTSSNPLNSLYLDSN
SFRQISNESFVLNNPLDTLDLSTNPLEFIEATVIASLNIKRIYLMNTHIALNQIRNFFHG
ISLSTYIEELNLSDTELHAIQAGLFTPLKGKSLAKVNIELNDINVIEDGGFDGLGGVNQL
QLGWNNLKLIKPNIFKGMTALRYLSLDKNRIVTLNEDAVPWNVSLIELNLASNEIISINS
SAFHGLKTLRKLDLSENHKLQLIESDSFASCPFIAELDLSNTHIFHLHFPYLPFLTSLIL
QYSFCPDKLIRPGNLETKAPSLSTLNLIDNILGSEKLWDSSTNKSSFYGLQNLSRLELSS
NPLLSIPPGIFKNLSNLQILRLDDCLLVVLETGIFSDLSHLILLSMQSNHLRAISTGLFD
KLQDLQYLFLPGNEFTYLDGNVFQYLSNLVFIDISKNRISGLNHSTFRPLSNLRKLYLSD
NPIVCNCDLKWFPVWLKGGNVELIDSFETICLDTVATLKQFRGKQLITFNPTGDCDANIV
LYSCLAVVGMVSIFTLGLIYYQRWWIRYRLFLLKLCFVGYEVIHDDADREEYQYDLAVML
HEADDEWVDQHLRPALIERLPDFNRIVCGDEELMLGMYYLDAVHYATERSFKTIFVISRA
ALQDQWFLMKFRTVLDHVNDVGTEKMVIVFVEDIGEDELPFLIRLFLSDHRPYLIWPGDE
RGQYYFWEELTKGLTVNLKCNQLIPPN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctctaatagtttgtcgttgttgaacgcagcatcttctaatttagagacattc
ccgggcgatgtcgttgagctcctaaccagtagtacgatcttaagtctttcttctaataga
atacgcaatatcaactggacgagctcgaatcccctcaatagtctttaccttgattcaaat
agtttccggcaaatttcaaatgagtcgtttgtattgaataacccgctggacaccctagat
ttgtctacaaatccactagaatttatcgaagctaccgttattgcttcgttgaatatcaaa
cgaatttatttgatgaatacgcatattgcacttaatcaaatacggaatttcttccatggt
atcagcttatcaacgtacatcgaagagcttaatctttctgacaccgaactccatgccatc
caggccggattatttacacctctcaagggaaagagtttagccaaagtcaacattgaacta
aacgacattaatgtgattgaagacggtggttttgatggattggggggtgtgaatcagctt
cagcttgggtggaacaaccttaaactcatcaaaccaaacatctttaaaggaatgactgcc
cttcgttacctttcgttggataaaaacagaatcgtaaccctaaatgaagacgctgtccca
tggaatgtctcactcatagagctaaacttagcaagtaatgaaataatatccatcaacagc
tccgcctttcatggattaaaaactctaaggaaattagacttaagtgaaaatcacaaactt
cagttaattgagagtgattcgtttgccagttgcccatttattgcagagttagatttgtcc
aacacacacatttttcatcttcattttccttacctccctttcctcacttccttaatacta
caatattcattttgccctgacaaattgattcgacctggtaatcttgagactaaagcaccc
tctttatcaacactcaatcttatcgacaatatattaggatctgaaaaattatgggattca
tctactaataaatcttctttctatggcttgcaaaatctatctcgattggaactttcaagt
aatcccttgttgtctattccaccaggcatcttcaaaaatttgtcaaatctgcaaatacta
cgtttagacgactgtttactcgtagtgttagaaactggtattttttcagatctcagccat
cttatcttattaagtatgcagtcaaaccacctgcgtgcgatttccactggtttatttgat
aaattacaggatttgcaatatttgtttttgccagggaatgaatttacatatcttgatggg
aatgtatttcaatacttatcaaatctcgtgtttattgatatttccaaaaatcgcatatcg
ggcctaaaccattccacgtttagacctctgtcaaatctcagaaagctttacttatctgat
aatccaatcgtgtgtaattgtgacttaaaatggttccctgtgtggttaaaaggaggtaat
gtagagcttatagattcatttgaaaccatatgccttgacactgtagcgactttaaagcaa
ttcagaggtaaacaattaataacttttaatcctacgggcgactgtgatgcaaacatcgtc
ctgtacagttgtttagccgttgtaggtatggtgtccatctttaccctaggtttgatctac
tatcagagatggtggatcagatatcggctgttccttcttaaactttgcttcgttgggtac
gaagtcatccacgacgatgctgatcgagaagaataccagtacgacctcgccgtcatgctc
cacgaagctgacgatgagtgggtggaccaacatttgcgaccagctctgatagaacgactt
ccagatttcaatcgaatcgtatgtggcgatgaggagctcatgcttggcatgtactatctt
gatgctgtccattacgctacagaacgaagtttcaagacgattttcgtgatcagtcgtgcg
gctttgcaggaccagtggttcctcatgaagttccgaactgttcttgatcacgtcaatgat
gttggtacagagaagatggttattgtatttgtggaagatataggagaggacgaacttcct
ttcctaatcagactgtttctcagtgatcatagaccatatctgatttggccaggagatgaa
agaggacagtattacttctgggaggaattgaccaaaggtctgacggtcaatctcaaatgc
aatcaactgataccacctaactaa
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