Lytechinus variegatus (green sea urchin): 121407614
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Entry
121407614 CDS
T11173
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121407614
03036 Chromosome and associated proteins [BR:
lvg03036
]
121407614
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121407614
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121407614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-C2H2_15
zf-C2H2_ZNF462
Zf-C2H2_ZNF451_C
zf-met
OmpA
zf-C2H2_ZNF462_1st
Actin_micro
AT_hook
AcetylCoA_hyd_C
TFIIIA_zf-C2H2
Motif
Other DBs
NCBI-GeneID:
121407614
NCBI-ProteinID:
XP_041454704
LinkDB
All DBs
Position
2:23507559..23519789
Genome browser
AA seq
933 aa
AA seq
DB search
MDENPEQPSSQSEEPVAPANQGEAEGNDAASMNVLETYLQNFNEELSSGPATAPGTGQQE
AAKSSGAATGEGSSEAPLVVREDSDDGADVQIEEGAEGDNVAVVKQEVADDEEEAGQTSQ
PAPDQATIDITHTLQLLANASANISNPNAAQENQEGEIGTEGTFMQQLDTSNLVDEHGAK
VDPSRIAGIQTVNGEQVVMVHNMEDGSSGIGQQQQVLMVSMEDNGQIDQGVAQIAFSGAP
VNMGDNIVYQTTQNTQFVPVSHNGTAQIAMTQSGSEPGTEVYTILQTVDGAETTTIATPT
TMVVSEGGVAQIGDEQTHVIATTSDEQPSYAELQPVSEHNVQQEEGALQMAAAEHDEMAL
VVQKPVKRKRGRPRKDEAKMQTQIVIVREVVEGEDGQDPSVYDFYAGEDDTAPVAAGDEK
TGVEVPGGKKKTRYVVPKFDDGRLLDQVLNRAKKGGPGRRPKVHECNLCGRIFRTSTLLR
NHENTHSGTKPYKCELCPKAFGTSGELGRHMKYMHTHEKPHKCPLCDYLSVEASKIKRHM
RSHTGEKPYKCTLCEYASTDNYKLKRHMRVHTGERPFACSQCDQSFSQKSSLKEHEWKHV
GNRPSHKCDHCDTTFGRYADMKTHVRKMHTAGEPLICKICENAFTDRYTYMQHVRGHRGE
KIYKCGECGYSAPQKRHLVIHMRVHTGERPYECEECHETFKHKQTLINHQRSKHNFVQEA
DGTKKRKSAEEIGSPSKRVTRRQRMQLQELEAVEEIVEPQTLTTTDGNTIQVSMAQGGEG
TVQLVQTSDGTMPVILTVGGDGQNVDEALQMMNGSLAAVQGNQEGEGQLMMAVPQGDGDN
MHLESQEATQQLETTEGSAAADNSQPPELTQEGQTQETPTPQDNQAITQEQAAALQQQMV
NQGIISEGSVIAAMEEDEDGTGDGTIYLFVEEQ
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaacccagagcaacctagcagccagtcggaggaaccagtggcaccagctaac
cagggggaagctgagggaaacgatgcagcatccatgaatgtcctggagacctatttgcaa
aatttcaacgaggagctctcatcgggccctgccactgcccctggtacaggtcagcaggag
gcagcaaagtcatcaggtgcagctacaggagaggggagctcggaagcaccactggttgta
agagaagatagtgatgatggagcagatgtacaaattgaggaaggagctgaaggagataat
gtagcagtggttaaacaggaggttgcggatgatgaagaggaggctggtcagaccagccag
ccagcacccgaccaagccaccatcgatatcacccacacattacagctacttgcgaatgct
tcagcaaacatcagcaatcctaatgctgcgcaggaaaaccaagaaggagagattggtaca
gagggcactttcatgcagcagcttgatacatccaaccttgtagatgagcatggagctaaa
gtagatcccagcagaatagctggtatacagacagtgaatggagaacaggtggtgatggta
cataatatggaggatggctcatcagggataggacaacagcaacaggtgctaatggtgtcc
atggaagacaatggtcagatagatcaaggtgtggcccagattgccttctcgggtgcacct
gtcaatatgggagataacattgtctatcaaaccacacagaacacccagtttgttcctgtt
tctcacaatggcactgcccaaatagccatgacacaatctggaagtgagcctggtactgaa
gtatacactatccttcaaacagtagatggtgcagagacaaccactatagccacacccact
actatggtagtctcagaaggaggtgtcgcccaaattggcgatgagcagacccatgtaatt
gcaacaacatcagatgagcagccctcttatgcagagctacagcctgtctcagagcataat
gtacagcaggaagagggcgccctacaaatggcagcggcagagcatgacgagatggccttg
gttgtacagaagcctgtcaaaaggaagcgaggtcggcctcgcaaggatgaagccaaaatg
cagacccaaatcgtcattgtcagggaagttgtagaaggggaggatggccaagatccctct
gtttatgatttctatgcaggagaggatgacacagctccggttgctgctggtgatgagaaa
accggtgtagaggttcctggaggcaagaagaagaccaggtacgtggtacccaagtttgac
gatggtcgtctccttgatcaagttctcaaccgtgccaagaaagggggccctggaaggaga
ccaaaggtgcatgaatgcaatctgtgcggtcgtatattccgtacatccaccctgcttcgc
aaccacgaaaacacacattctgggaccaagccctacaaatgtgagttgtgtcccaaagct
tttggcacgtctggtgagcttgggcgccacatgaagtacatgcacactcatgagaagccc
cacaagtgtccattgtgtgactacctgagtgtcgaggcgtccaagatcaaacgacatatg
cgttcccatactggagagaagccgtacaaatgcactctgtgcgagtatgcgagcacagac
aactacaagctcaagcgtcacatgagggttcacactggtgaacgtccttttgcttgctct
cagtgtgaccaatccttctctcagaaaagtagtctcaaggagcatgaatggaaacatgtt
ggaaatagaccatctcacaaatgcgaccactgtgataccacctttgggagatatgccgac
atgaagacccatgtccgtaagatgcacacggctggtgaacccttgatatgtaagatttgt
gaaaatgcatttactgatcgatacacctacatgcagcacgtgagggggcacaggggtgag
aagatttacaagtgtggggagtgtgggtactctgctcctcagaaacggcatctggtcatc
cacatgagagttcacaccggagaaaggccttatgagtgtgaagagtgccatgagaccttc
aagcacaagcaaacccttatcaatcatcaacgcagcaaacacaactttgtccaggaagca
gatgggaccaagaaacgcaaatctgccgaggaaatcgggagtcctagcaagagggtaacg
aggcgtcaacggatgcagttgcaagaactggaggccgtagaagagattgtcgaacctcag
accttgacaacaaccgatggcaacacgattcaagtttccatggcgcaagggggagagggc
acggttcaacttgtgcaaaccagtgatggcaccatgcctgttattctaactgtaggagga
gatgggcagaatgtggatgaagcactccagatgatgaatgggagcttagctgccgtccag
ggcaaccaggaaggggaagggcagttgatgatggccgttcctcagggagacggggataac
atgcatcttgaaagtcaagaagccacccagcagcttgagaccactgaaggttctgcagct
gcggacaactcccagcctccggaactgacacaggaaggtcaaacccaagagacacccact
ccacaagataaccaagctatcactcaagagcaagctgcagcgttacagcaacagatggtc
aatcagggcatcatctcagaaggatcggtcatcgcagcaatggaagaagacgaagatggc
accggggacggcacaatatatctatttgttgaagaacagtaa
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