KEGG   Lytechinus variegatus (green sea urchin): 121407648
Entry
121407648         CDS       T11173                                 
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase-like
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121407648
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lvg01009]
    121407648
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lvg03400]
    121407648
Enzymes [BR:lvg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     121407648
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     121407648
Protein phosphatases and associated proteins [BR:lvg01009]
 HAD phosphatases
  Other HAD phosphatases
   121407648
DNA repair and recombination proteins [BR:lvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121407648
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Zeta_toxin FHA Hydrolase Hydrolase_6 HAD_PNKP HAD AAA_16
Other DBs
NCBI-GeneID: 121407648
NCBI-ProteinID: XP_041454755
LinkDB
Position
2:24178235..24196392
AA seq 624 aa
MQCQLKPTRKNAAEFMAPHNIDVPRDQPTILGRSPVTGITEKKLSRQHVEVTANYSSQTL
TVKQLGPNAACYQGEELQKGATVKLSNGDCFELLKGKFEYSVHFSNTETSTPSTSTSSGS
LSRPESKAKGIEEDGFDQEREQVKSSKKRPLDSDSDDGDSEQDEKPEVKKSKTETKPPGD
DIDQKLAALQRKAEQAEQKRKDKKLESTPQVDGGGVKSLSGNADISGRGSTTAPAAGSGK
PSTVEEWKEEGKLLVYKSVGVKAGSKIVCFDMDGTLITTSSGKVFAQNADDWKIIYSEVP
GKLKKLHDGGYKIVIFTNQLGISKGKLTVKEFRRKLGNVVKKLGVPVQAFAATSGGVYRK
PMTGMWEYLLSKGNDGIAIDVKASMYIGDAAGRPADWGPKKKKDFSMSDRLFALNIGIPF
KTPEEFFLGFKPAKFNMPAFDPRTVSTSTPLFNPPSTALPASVQEVLILVGYPASGKSTF
VKNHLLTHKYVHVNRDTIGTWQKCVAACSSALGKGQSVVIDNTNADIESRKRYIDCAKKA
NVQCRCFSFTTTIDHARHNEKFRQLTPSGKNHASIADMIFYSFRKNFVAPKKEEGYSEVV
QVNFLPSFNNSDEEKLYKKFLLEK
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgcagtgtcaactgaaaccaacacgaaaaaatgcagccgagttcatggcacctcacaac
atcgatgttccccgtgaccagccgaccattcttggacgcagccccgtaaccggcatcacg
gagaaaaaactctccagacagcacgttgaagtgacagccaattattcctctcagacgctt
actgtaaaacagcttggccccaatgcagcctgttaccaaggtgaagaacttcagaaagga
gccacagtgaaattatccaatggtgattgctttgagcttctcaaaggaaagtttgaatac
agtgtgcactttagcaatactgaaacatcaactccaagcacctccacatcatcgggaagc
ctatcaagacctgaatcgaaagccaagggcattgaagaagatggatttgaccaggagagg
gagcaagtgaaatcttcaaagaagagacccttagatagtgatagcgatgatggtgatagt
gaacaagatgaaaagccagaggttaagaagagcaagacggaaacaaagcctcctggagac
gacatcgatcagaagctggctgcgcttcaaagaaaggcagaacaggctgaacaaaaacgc
aaagacaagaagcttgaaagcacaccccaggttgatggaggaggagtaaagtctttatct
ggaaatgcggacatatctggaaggggtagtactactgcccctgctgctggaagtgggaaa
cccagcacagtggaggaatggaaggaagaaggcaaattgctggtctataagagtgtagga
gtgaaagcaggctcaaagatagtatgttttgacatggatggcacactgattacgacatca
tcagggaaggtctttgcgcaaaatgcagatgactggaaaatcatctactctgaagtgcct
ggcaaactaaagaagcttcatgatgggggttacaagatagtgatattcaccaaccaactt
gggatcagcaaaggaaagctgactgtgaaagaattcaggaggaaacttggcaatgttgtg
aaaaagcttggagttcctgttcaggcttttgctgctacttcaggaggtgtttaccgtaaa
cccatgacagggatgtgggaatacttgctttctaaaggcaatgatggtatcgctattgat
gtgaaggctagcatgtatattggagatgctgctggcagaccagcagactgggggcctaag
aagaaaaaagacttctccatgagtgatcgcctgtttgccctgaatattggtatcccattc
aagacacctgaagagttcttcttgggtttcaaaccagccaagttcaacatgccagctttt
gatccgagaactgtctctaccagtacaccattgttcaatccacccagtacagcattgcct
gccagtgtacaagaggttctcatactagtgggatatcctgcatctggaaagagcacattt
gtgaaaaaccacctactgactcacaaatatgtccatgtgaatcgggataccataggcaca
tggcagaagtgcgttgctgcttgctcctctgctctcggcaaaggtcagagtgtagtgata
gacaacaccaatgctgatattgaatcaagaaagagatatattgactgtgccaagaaagcc
aatgttcagtgtagatgtttttctttcacaactactattgatcatgcaagacataatgaa
aagttccggcagctgaccccttctggtaagaaccacgcttccatcgctgatatgatcttc
tactccttcaggaagaattttgtggctccaaagaaggaggaaggttactcagaggtcgtt
caggttaactttctgccatcgttcaacaatagcgacgaagagaaactctacaagaaattt
cttttggagaaatga

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