Lytechinus variegatus (green sea urchin): 121407665
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Entry
121407665 CDS
T11173
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121407665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvg02000
]
121407665
Transporters [BR:
lvg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121407665
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Gene cluster
GFIT
Motif
Pfam:
SNF
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
121407665
NCBI-ProteinID:
XP_041454785
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Position
1:17540289..17593832
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AA seq
796 aa
AA seq
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MINSSMEVVVSTDTDDVDLSEDAMGEVNPIPIDIEDEERLRVSPSRKSRLTASDLISVSS
SLPDSVLPQYPDVSIAPSITSSMKPHISKSVEDLLISADLENCRNRLSRHGYDSMRSLRL
ASKEDLVEIGLPRGHAGLLVYAIAQEDKGHGPGKGLTQIETRKLEDQVLTPKVLTSSEAI
SAMSGKGDYKVVPGGGANDVGKDLGVKDPKAAAPDREGWGKKLDFLLVCIGYAVGLGNIW
RFPYLCYTHGGGVFLIPYFLMLFLAGMPLMFLELAFGQYGGEGPITIWKACPLFAGIGWA
MVMISGMVAIYYNIIMAWTTLFFVRSFTSEVPWKSCNNTWNTDACQENSSVAMDMGLNDT
KRPSQEFYYNYVLGVDGHNLDDMGAMKWELVVCLLFSWIVIFCCICKSVKSSGKVVYFTA
TFPYVILTILLIRGVTLPGADIGINYYLSPRWEKLKETRVWGAAATQIFYSLGPAWGGVL
TFSSYNKFNNNCIVDAICIPIINCLSSFYAGFVVFSTLGFMSYKTGISIDQVAVKGPGLV
FETYPEAISQMPVAPLWAILFFFMFFLVGLDTQFGMVETVVSGLVDYFPNHLRKHGTLVA
LIVCVFFFLLGLPMASQGGIYMFELINWYSCWISLMLVGCFECLAVVYFYGVCRFMGDIR
RMVAEYKWMQPVLTPLLYWYSSCWLVITPAIILFITVFGMINYVPVYFGDYVYPKWSEVL
GWLMAVVPLLTIPLVMVIKLCFASEGENYAQRFLFLLKPTPEWENKEKQFQAKTHLPLAY
EKDVELDSLKTNGMYA
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgatcaattccagcatggaggtagtcgtatcaaccgatacggatgatgttgatctttct
gaagatgctatgggagaggtcaacccaatccctattgacatcgaagacgaggagaggctc
agggtgtcgccgtcgaggaagtctcgactcactgcatctgacctcatcagcgtgtcgtca
tccttaccagactctgtcttaccccagtatcccgacgtctcgatcgcaccgtcgatcacc
agctcaatgaagccacatatctctaagtcggtcgaagatctcctgattagtgccgaccta
gagaattgtcgtaataggttatcgagacatggatacgattcgatgaggagtttgagattg
gcatctaaggaagatttagtggagataggcctacccagaggccatgctggacttcttgta
tatgctattgctcaggaagataaaggacacggtcccggcaagggcctgactcagatagaa
acgaggaagcttgaagatcaagtcttaacacccaaagttttaacttctagcgaagcgatc
tccgccatgagtggaaagggcgactacaaagtagtgccaggaggcggagcaaacgatgtc
gggaaagacctcggagttaaagacccgaaggcggccgctcccgaccgagaaggatgggga
aagaagctggatttcctcctggtctgtatcggctatgccgttgggttgggaaatatctgg
cgctttccttacctctgttatacccatgggggaggtgtattcctgatcccctactttttg
atgctgtttctggccggtatgcctctcatgttcttggagttagccttcggtcagtatgga
ggcgaaggaccaatcaccatctggaaagcatgtccccttttcgcaggtatcggatgggct
atggtgatgatctcaggcatggtggccatctactacaacatcatcatggcgtggactaca
cttttcttcgtgcgttcgttcacatctgaggtgccatggaaatcatgcaacaacacgtgg
aacacggacgcatgtcaggaaaactcatccgttgccatggatatgggtttgaatgatacc
aagcgcccatcccaggagttttactacaactatgtattaggtgttgatggtcacaatcta
gatgacatgggcgctatgaaatgggagcttgttgtatgccttctcttctcctggattgtc
atcttctgctgcatctgcaaaagtgtgaagagctctggcaaggtggtatactttactgca
acctttccctatgtgattctcacaatccttctcatccgaggcgtgactctaccaggagca
gatattggtatcaactactacctatcacctcgctgggagaaactcaaggagactcgagtt
tggggtgcagcagcaacacagatcttctactctcttggacctgcttggggtggagttctt
actttctctagctacaacaagttcaacaacaattgtattgttgatgcaatctgtatcccc
ataatcaactgtttgagtagtttttatgcgggattcgtagtcttctcaacgctgggattc
atgtcctataagactggcatctcaattgatcaagtcgcagtcaaaggtccaggtcttgtt
tttgagacttatccggaagcaatttcccagatgcctgttgcccctctctgggctattctc
ttcttcttcatgttcttccttgtcggacttgatacacagttcgggatggtggagactgtt
gtgagtggactggttgattacttcccgaatcatttgagaaaacatggcaccttagtggcc
cttatagtctgtgtgttcttctttcttcttggacttcccatggcttctcagggtggaatt
tatatgtttgagttgataaactggtacagctgttggatatccctcatgttggtgggctgt
tttgagtgtttggctgttgtttatttctatggtgtgtgtcgtttcatgggtgatatcaga
cgtatggttgccgagtacaagtggatgcaacctgttctgacaccactcctttactggtat
tcaagttgttggctcgtcattactcctgccattatactgttcataacagtgtttggaatg
atcaactacgttcctgtctactttggggactatgtctaccctaagtggagtgaggtgctt
ggctggctaatggccgttgtacctctactgaccatcccgcttgtgatggtcatcaagcta
tgctttgcttcagaaggagaaaattatgctcagcgttttctgtttcttctcaagccaaca
cctgaatgggaaaacaaagagaaacagtttcaagccaagacccatctaccactggcatat
gagaaagatgttgagctagactccctcaaaaccaacgggatgtatgcgtaa
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