Lytechinus variegatus (green sea urchin): 121407881
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Entry
121407881 CDS
T11173
Name
(RefSeq) rotatin-like
KO
K16484
rotatin
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lvg03037
]
121407881
Cilium and associated proteins [BR:
lvg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121407881
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
DUF826
Motif
Other DBs
NCBI-GeneID:
121407881
NCBI-ProteinID:
XP_041455050
LinkDB
All DBs
Position
2:32496749..32555738
Genome browser
AA seq
2278 aa
AA seq
DB search
MDDPRDKATNLNHIFVKLGHEIEEIRCRALTNLLCKLEHRLIEEADLVQEHHLLIRLLEW
FNFKSCPQKKDVLLLIQRLAKHPSASEHLVKIGAVQFLSQLRQDIEDNLQASIDDILELL
LSLPGEVTSSVSYEHCFYEAQTTGHNGDVIQDASSIPKVSPRSLTLTPDMANGYFHLGLP
SPTGALKNKSRRAILQEQCPGSKGICGVIFSTFPWLPLTATDVHVLSSTNNSLCSSDVQV
VITSCDFINDVVLHDFPAEIFLQRPNIIQSLLSLLADHRQDDESKARVTQHAVYCLTNIS
ILLMARFQFYHDPALYCPKQEFLSRTNSTTSSVGGEQSHSTIQSTLSSESRPSIIGRTNR
RVSGDGRDWDSHSSVGSSPILPGSISPPAVDPETDSDDTIVLQFSQMTLPQFTLDAMLQA
LNLLKTSSLELTSPLVHLLHRAFRLLSVAMTADIWQDKSVSGRLLTDKLSECLESMGSLI
HHHHQMAHCGHMTSHMTSQQQMHHVQTYQVLATFTLAVINKFAPLSKAQDLIPEELSTAL
GMLLIDAGFNLAYPECIKNLLCYVASVSPEQYSVYTDMDQIISSMQSACALVKGRNSLEL
HDQVELAQSACLAWSYYEMVDIIQTLVQCSSDICRRTDDTGDVDDKRASRLALLHYLAHP
DGSCRLHTYRACLQIIKDSLKVAEAVHPRSEVSQRVTFLLDPSILHEIACYGLDDSNQEV
QEMSESILLTLLQGRLLMSQASWDTLLQAFIPIMPLLQAHASSHPAVSECANDLINKCRD
PAVFGSYARLPALEQIRGGLRMLFSKDFRVRADASSALLWHLVNEPEAEMKRPILSPPPS
GIEELFVFHTKASLDNHNGMSVFQEDGLLQVLNIFTSENTERDLKKSALQQMAIILQDSR
LHHTFVSHGGLEKMMETLATIIIPRPQSLLTCDLVPPLVSILRHLVHANTARRRKMAHQS
GLYLMLLRASLICRGSEEARQEIAHLITLLIFDETITMTTDGQDNSRKACFPLVITQHFQ
LPFRCGITSSARPHRLTPRPSPDPMRLSENWSRLKLEWMKAWTIGQDGLIQALLHDDKRM
VEYSSNLLLEPEERALLATSYPPTCLRQSLQTILAATSHFTVKQAICQLSLMKHWASLQQ
NRGVNEGGEMSSLTRALLGFDWKAALNRFLEVVPANSEDEQLLAHLLSLLSQLLRSPDLV
TPDLIEWVGSTCSGGKLSLVELLGKYPPAGQMGEGQTDGGKGKEGSQALVRKEILRLLTG
FVQNLPLSRDAWRRRGMFLGGSLVHGLLGSLDLADALHFYDLPSLESTLHCLVHVTARPG
WSLDWADGDSLTLCQQMLKSLQEVVSAFHVGRGGTAMSYMGKGVTKSATLCLLHLTREMA
ARAVDKSWPMDWLYTSKGSSEPGFSWLTPLLSYRDPEVRAAGLGIAASLASSEQGCVAIA
TCFQQRTGGVWGLALSVLLDRSECSVVRQQAASFLANLLLQPFKSDDPPKGQKSRHSDNQ
QKIGIAGLSAVNALLQYHRFFPEVATMFTHYYPDATIQPISIVEDSTLPSSSTQSGPPTL
TTPDSSENEGSVRPSQSGGQRSQDDRARTHLEMRSPEGHSISSQDTVSSSSSGITVGRFE
SVVTPGLVTSTTCLLANLLAVIPSDAVHAVTKENILQTLQGVINVNRIQSLLQEATPSSS
SADHTPLPTDPRHSPKSHYASQVQLCRQTSMCAAVLRLYLACLQQDTPTLLDALHDGKLI
AKCCRLLAIQLPEQGDTKLLGEIHELWRISFEFLTTLAHLSGLEHLNSLLGKSWNYITDC
IISVVSKPSPASTRITALNFLSTILTKAEQEEETRRSSTRSLEEGYEEAAAEGRDEKSLL
AGLLDERRDQEGTSTGNELGETLLKAYDGSLPRSTGPSLAQEKPAVFSALKVLLSISDTA
KHQALAAGLVETTVDTLKQIHAKLTLESLHMDKTGAKKKEDPLFIELHSSFDLLNSIMVN
SHDVKMAAHQAGLGVTIHKLWAWLGLDVKLMMTTLLLLTTYTARCPVVCAAVASCGPGQT
GNSILHYLIRLVERERLKVEKGSESDMLAQVFSILGNLVWYGECRNVLWKSGFLGSFIKV
KLPRSSKQTKNAASLHTFAALWLQLLTNLTFATEGQQMIMRIPDALDLLIDFAQCPVSAL
QDSALLVLHNLCYLTANKTRLVANDKLVRLFLTTLTDGCLKTQFTVTSALYALIYDSQKA
KALLKTSRLSLSLQELEMVLQKEMQRPQPPATLIEATRRDMATRCQFVTSAITALLEE
NT seq
6837 nt
NT seq
+upstream
nt +downstream
nt
atggacgatccaagggataaggcaacaaatttgaatcatatatttgtgaagttaggtcat
gaaattgaagagattcgatgtagagctttaaccaatctcctgtgcaagcttgagcatcgg
ctcattgaggaggctgacctggtccaagagcaccacctgttgatccgtttgttggaatgg
tttaatttcaagtcatgtcctcagaagaaagatgtgctgctgctgattcagagacttgca
aagcacccctctgcctcagaacacttggtgaagattggagctgttcagtttctctctcag
ttgaggcaagacattgaggataacttgcaggcatccatcgatgacattctggaactccta
ctcagtctgcccggggaagtcacttcctctgtgtcctatgagcattgcttctatgaggct
cagacaacaggtcataatggagatgttatccaagatgcttcatccattcccaaagtgtct
ccgagatccttgacactgacaccagacatggccaatggctactttcatcttggattgccg
tctccaacaggtgcactgaagaataaatcaagaagagcgatcttacaagaacagtgtcca
ggtagtaaaggaatatgtggagtgatattttctacattcccatggttacccctgactgct
acagatgtccatgtcctttcatcaacaaacaactctctgtgtagttctgatgtccaagta
gtaatcacatcctgtgatttcattaatgatgttgtactccatgacttcccagctgagatt
tttcttcagagaccaaatatcatccagagcctgctgtctcttctagccgatcaccgccaa
gatgacgaaagcaaggctcgtgttacccagcatgccgtctattgtctgactaacatctct
atactgcttatggctcgtttccagttctaccatgatcctgccctctattgtccaaaacaa
gagttcttatcgaggaccaattcaacaacatcatctgtgggaggagagcagtcccattcc
accatccagtccaccttgagttccgagtctaggccctctatcataggaaggaccaatagg
cgtgtgagtggtgatggcagagactgggattcccacagctctgttggttccagccccatc
ttacctggttccatcagccctccagcggtagaccctgagacagactctgatgataccatc
gtgcttcagttctcccagatgaccctgccacagttcaccctcgacgccatgctccaggca
ttgaaccttctcaagacgagttccctggagctcacttctccccttgtccatctactccat
cgagcattccgccttctcagcgttgccatgacagcagacatctggcaggacaagagcgtt
tctggaagactgttgactgacaagctgagtgagtgcctggagtctatgggaagtcttatc
catcatcaccaccaaatggcacactgtggtcacatgaccagtcacatgacaagtcaacaa
cagatgcatcatgttcaaacctaccaagtcttggctacattcaccctggcagtcatcaat
aagtttgctcctctctcaaaggcccaggacctgatacccgaggagctttccacagccctt
ggcatgctgcttattgatgcaggattcaacctggcctaccctgaatgcatcaagaacctc
ctgtgttatgtagcatcggttagcccagagcagtactctgtctacactgacatggatcag
atcatctcatccatgcagagtgcttgtgctctcgtgaaaggaaggaactccttggaattg
catgaccaggttgaattggctcagagtgcatgtcttgcatggtcatactatgagatggta
gatatcatccagactttagtccaatgctcctctgatatatgcagacgtacagatgataca
ggtgatgttgatgataagagagctagtcgtttagcattactccactacctagcacatcca
gacggtagctgcagactacatacatacagagcatgtcttcagattatcaaggactcactg
aaggttgccgaagccgtccacccgaggtcagaggtcagccaacgtgtgacctttctactt
gacccctccatccttcatgaaatagcatgctatggactggatgattctaatcaagaggta
caggaaatgagtgaaagtatcctgctcactttgcttcagggtcgtctactcatgagccag
gcatcgtgggataccctgttacaagcgtttattcccatcatgcccctattgcaggcccac
gccagcagccatccagcggtaagtgagtgtgcgaatgacctgatcaacaagtgtcgagac
cctgctgtctttgggtcctatgctagactaccagccctagaacagatcagaggtggactg
aggatgttgtttagtaaagatttcagggtacgtgctgatgcatcctcggccctcctatgg
cacctagtcaacgaaccagaggccgagatgaagcgcccgatcctcagccccccaccctcg
gggattgaggaactgtttgtgtttcataccaaggctagtctggataatcacaatggaatg
tcagtgtttcaggaggatggcctcttacaagtcttgaacatctttacctctgagaacaca
gagagggatttgaagaaatcagctcttcaacaaatggctatcatattacaagatagcaga
ttgcatcacacctttgtatcccatgggggtctagagaagatgatggagaccctagccacc
atcatcattcctagacctcagtccctcttgacatgcgacctggtaccccctctagtctcc
atcttacgtcatttagtacatgctaacacagcaaggaggaggaagatggcgcaccagtct
ggattgtacttgatgctactcagagcctcccttatctgcagaggttctgaagaagccagg
caggagattgcccatctcatcacactcctcatcttcgatgaaacgatcaccatgacaaca
gatggccaggataattccaggaaagcctgctttcctctagtcatcacacaacattttcag
cttccattccgatgtggtataacctcttcagctcgccctcatcgactgactcccagaccc
agtccagatcccatgagactgtctgagaattggtccaggctcaaactggaatggatgaag
gcctggactattgggcaggatggtctgattcaagctttacttcatgatgacaaaagaatg
gttgaatacagctccaatctgttacttgaaccagaggagagagctctgttagctacatca
taccctccaacctgtctccgtcagtccctccagacaatcctagctgccacctcccatttt
acagtgaagcaggccatttgtcagctgtcccttatgaagcattgggccagcctacaacaa
aataggggtgtaaatgaaggcggagagatgtcaagtttaactagggcattgcttggcttt
gattggaaggcagctttgaacagattccttgaagtagttcctgccaactctgaagacgag
cagctcctggctcacctcctctccttactctcccagcttctgagatcacccgacctagtg
acccctgacctcatcgagtgggtcgggtcaacctgcagtgggggcaagctctcgctggtg
gagctgctcgggaagtacccccctgccggtcagatgggggaggggcaaaccgatggtggg
aaggggaaggaagggtcacaagctctggtgaggaaagaaattctgaggttattgactggc
tttgtgcagaatctcccgctgtcacgggatgcatggagacggcgagggatgttcctcggt
ggttccttggtccatggtcttctaggaagcttagatcttgctgatgctcttcatttctat
gatctgccatcccttgaaagcacgcttcattgtcttgtacacgtgactgccagacctggt
tggagtttagactgggcagatggcgatagcctcacactgtgccagcaaatgctcaaatcg
ctccaagaggttgtatcagcatttcatgttggcagaggtggtacagcaatgtcttacatg
ggaaagggagtgactaagagtgctacattgtgtctactacacctaaccagagagatggca
gcaagggcagtagacaagagttggcctatggattggctgtacaccagcaagggttcatca
gaacctgggttttcatggcttacacctttgctctcatacagagaccctgaggtgcgtgct
gctggtcttggaatcgctgcatccttagcctccagcgagcagggttgtgttgccatagca
acctgcttccagcagcgaacaggtggtgtttggggcctggctctctctgttctccttgat
cgttcggaatgcagtgtagttaggcaacaggcagcatcttttcttgctaacctcctgctg
cagccatttaaatcagatgacccacccaaaggtcagaagtccagacactctgacaatcag
caaaagattggtattgctggactctctgcggtcaatgctttactccagtaccatcgcttc
tttcctgaggtagcaaccatgttcacccactactacccggatgctaccatccaacccatc
agcatagtggaagattccactctgccatcgtcaagcacacagagtggaccacctacactc
accacaccagattcatcagagaatgagggcagtgtaagaccaagtcaatcaggaggtcag
aggtcacaggatgatagagcgaggacacatctagaaatgagatcaccagaaggtcattcc
atatcgtcccaagacactgtctcctcttcctcctctgggatcacggtaggtcgctttgag
agcgtggtgacccctggtctagtgacctctacaacatgtctcctcgccaacctcctagcc
gtcataccaagtgatgcggtgcatgcggttaccaaggaaaacatcctccagactttacaa
ggagtcatcaatgtcaaccgcattcagtcactcctccaagaagccacaccctcttcttcg
tctgcagaccacacccccttgccaacggaccctcgccactcccccaaatcccactacgcc
agccaggtacagctgtgcagacagacctctatgtgtgcagctgtcctcaggctgtatctg
gcttgcttgcaacaggacacgcccaccttgcttgatgcattgcatgatgggaagctcatt
gccaagtgttgtcggcttcttgccattcagctgccagaacaaggagatactaagctgtta
ggtgaaatccatgaactttggaggatatcatttgagtttctgacaacccttgctcacctt
tcagggttagaacatcttaatagtctccttggaaagagctggaattatatcactgattgc
atcatctccgtagtaagcaagcccagtcctgcatccacccgcatcaccgctctcaacttc
ctctccaccatccttaccaaggcggagcaggaggaggagacaaggagatcatctaccagg
agccttgaggaggggtacgaggaggcagccgcagaaggtcgagatgagaaatctctcctg
gcagggctgctcgatgagaggagagatcaggaaggtacctctactggtaatgagttaggt
gagaccttgttgaaggcctacgatggttcccttcctaggtctacgggtccaagtctagcc
caggaaaaaccagccgtcttttcggctctcaaggtcctcctctccatttcagatacagcc
aagcaccaagcactagctgctgggctagttgagaccactgttgacactctgaaacaaatt
cacgccaaactcaccttagagagtcttcacatggacaagactggtgctaagaagaaggag
gatccattgttcatcgagctccattcttcctttgatcttcttaacagtattatggtgaac
agccatgatgtcaagatggcagctcaccaagcaggtttgggtgtaaccattcataaacta
tgggcttggcttggtttggatgtcaagctcatgatgactacactcttactactcaccacc
tacactgcccgatgccctgtcgtgtgtgcagcagttgcttcttgtggacctgggcagact
ggtaactcgatccttcattacctgataagactggttgagagggagagattaaaggttgag
aaaggatcagaatctgatatgctagctcaggtcttctctatccttggcaatctggtttgg
tatggggaatgcaggaatgtcttatggaagagtggatttctggggtcattcatcaaggtc
aaacttccgagaagctccaagcagaccaagaatgccgccagcttgcacacgtttgctgcc
ctctggctacagctcctgaccaacctgacttttgcaacggaagggcaacagatgatcatg
agaattcctgatgcccttgatctgttgattgactttgcccagtgtccagtctctgctctc
caggactctgccttgctggttttacataatctctgctacctgactgctaataaaacaaga
ttggttgctaatgataaattagtgaggctctttttgaccactttgactgatggatgtctc
aaaacccagttcacagtgaccagtgctttgtatgctctcatctatgacagccagaaagcc
aaagcactattgaagacatctcgtctgagcctgagtcttcaagaacttgaaatggtcttg
cagaaagaaatgcagcgccctcagcccccagccacactgatagaggcaaccagaagagac
atggctacccgatgccaatttgtaacatcagcaatcactgctcttctggaggaatga
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integrated database retrieval system
