Lytechinus variegatus (green sea urchin): 121408003
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Entry
121408003 CDS
T11173
Name
(RefSeq) F-actin-uncapping protein LRRC16A-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121408003
Membrane trafficking [BR:
lvg04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
121408003
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Carm_PH
CARMIL_C
LRR_6
Motif
Other DBs
NCBI-GeneID:
121408003
NCBI-ProteinID:
XP_041455232
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All DBs
Position
2:complement(36980005..37077194)
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AA seq
1840 aa
AA seq
DB search
MTSTSEIPAEILAGVKQALGKNYEHGPIKLVKMNKGTEQEDRVLALTQYRTYVLLCAART
RVEFKFNHLQIDSLESNKPLKLKFGFPKERDRDKSLSFTMKSINDTLDVIEFILKSLQRV
FPLTSTDKLIREIHMEPPERRSHIEARLNRSSMVEQGPCGGFSHMYRFMCDYFDLPYLAE
VAWDVDTIYLSQDCKELRINDFDDLEPKHMLPIIAVLNYNTWFTHLTVVNYKLTSEALKE
IPKVIRSSHTLESLTLDGVGLKWDFLQEMSLSLTANSQSNLRSINLSNNPVDDRGIRHLC
GPLQKMTHGLVELRLVKTGMTAEGASHLGKALGENNFIPTTLKVLDLSGNAFKDAQHGKT
GLRREDRSAPTFSNSTTSSLGRNQGRTSRISASLLSGLSKKRSSRRRSRGSLFLSSVSFC
SIQNLYNFLYQSNAITHLNLADTDCSLNHIFEALHKGCFLSLVHLNLSGTFAHSKHHSVV
PRQVKNFFTAAKSLKTINISRNRCPPALVKEILETIGFNKDLNRLEIDLSSNELGQEGAD
AVSSCISMLNNVTTLNLRDNGFNVAMVSLVAWMGQNHSLECIDLSQNMSPSSKKADREKV
VVALEEMIQNPDLPLHTILLAGNRFRLETQQLINALGSNTTLLSVDLSGNEMKDIGARLL
AKALQINNKLQTVVIDNNNIGLQGFQDLAQALERNYTLKRMPIPTTDMMAAMQKNHEKHE
KTEAAIQKIQECLQRNHSPRKFSNKQAFLLQRGFLYTTAHQMVDKLVVHIEDMATELTQK
SDADLQEKISTARGLIDDANNSKKIYDVLQNVVGRSDDEDLTEKLREIACLIESEMEARL
ERNANGMVDGTSQLCGYVMQDRCLYEKIEDTCREHYRLPPRFVEDLVDQISAETSNQCSE
ANLAMASFISDSILDEIIEQLSTVEAELSDELKKFRDEVANGTTVRQVESIFEDSREEEE
EEEDDSKEEQEEENDEEKTEEGQVQNEEKENVEIKIEDEGSADGSDTNEVALQNGGTEVS
KTDDDAGASSGGQALPVASLPQMTKKQNIRVQRAKSVKRPVSELPTGIPVIPIDIEEDKP
EERPSLSPLPDVQLPDLPDPNQSAKEETDSSKSFSTPRSKPKPSLLKPPSKSPGSTPKLV
EFESVSNQAAAPLRDVRADRPRVSRAMRPARARPAPRPSDQNPEGIIEEEDDLSKMWSSP
TVPGFETQESPSSSPSGSQTSLSESKKSEKKNFLGGLFRRKKDEKKDSKKDSDKKDSKKD
KKETKKEKKEREDREKKEKEERERKEKEQKEKSKKSKTPLTPTSYKSEPVIDDIDRVSKA
EPTTPRFDLSPAQDTPSDVGAEKEKTDSTEAPSKHDTTEDQPKDKIEELTPVAPPKKALR
PVTGVSMFGADVMQQMQQRRMFKSANNEDVKETPEPKSPTTAPKPAFRSSPPSSEKVTHK
PLVLPTSPSKSLSSPNPSPAASPLSPKATSPGPTSPRPASTSPKPVPALRPVPKPRKSEL
PTGADTKPLVKEVKEEEEKGKGTEEVARAGSAKSTSAVVQEKTEADAAKVDSKEQPPAAE
EDTKPLEEAVAAKKTKSESDEDASAEKKQVEESVQDQAKNKEEDKKLEDSSKTSEEKEVV
AKEKPQKVEDSPAVSLDGDKNAESDKTKGPESTPEDSLVRTGSTSSEKSSPLISSGSLKD
VEKTTEPVIAPKKDSIKSPSLPISPKSIGTDGSPKRLSSKPKPAVPLSTKPRPASISKKP
VLPPPKPDGSIADHRRSLKPVTARKPEAKERTSLIGLHNSGPKESNGESTESIPPKPSDL
KRASKTSINGQTPKESNKTAVTPVEEEKDETPKEKEAIFV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaacgtcggaaataccagcggaaatacttgctggagtgaagcaagcgctgggt
aaaaactatgaacatggcccgattaaactggtcaagatgaataaaggcactgagcaggag
gacagagttttggctctcactcaatacagaacctatgtgctactctgtgcggcaaggaca
agggtggagtttaaattcaatcaccttcagattgattcattggagagtaataaaccactc
aagctgaagtttggttttccaaaggagagagacagagacaaatctctgagcttcaccatg
aagtctatcaacgacactctggatgtcatagaattcattctcaaatctctgcaaagagtg
ttccctctcacaagcacggataaactaataagagagatccacatggagccaccggaacgt
cggagtcacatagaggcgcggctcaatcgttcgtcgatggtggagcagggaccgtgcgga
ggttttagtcacatgtataggtttatgtgtgactattttgatttgccttatcttgctgaa
gttgcctgggatgtcgatactatttatctctctcaagattgtaaagagttgaggattaat
gactttgatgatctagaaccaaaacacatgttgcctatcatagcagtactaaactacaac
acctggtttacacatctcacagttgtcaactacaaactgacctctgaagccttgaaggag
atccctaaggtcatccgctcgtcacatactcttgaaagtcttactctagatggggttggg
ttgaaatgggatttcctgcaagagatgagcctctctctgacggcgaacagccagtccaac
ctccgtagtatcaacctctccaacaatcccgttgatgatagggggatacgccatctatgt
ggccctttgcagaagatgacccatggactggtggaacttcgattggtcaagactggcatg
acagcagaaggtgcttctcatcttgggaaggctcttggagaaaacaacttcattcctaca
actctaaaggtcttggatctatcaggaaatgcattcaaggatgctcagcatgggaaaaca
ggattaagaagggaagatcgatccgccccaacgttcagcaattcaaccacatcctcttta
ggtcgcaaccagggcagaacgtcgagaatatccgcctctctgctctcgggtctgtccaaa
aagcgatcaagtcgccgccggagtagagggagtcttttcctctcttcagtatctttttgc
agtatccagaacttgtacaacttcctgtaccagtccaacgccatcacccacctgaacctg
gctgacacagattgttccctgaatcacatctttgaagcccttcacaaaggatgtttcctc
agccttgttcatcttaacctgtcaggaacatttgctcacagcaaacatcattcggtagtg
ccaagacaagtgaagaacttcttcaccgcagctaaaagcctcaagactattaacatttcc
aggaatagatgccctccagcgctagtcaaagagatcttagaaaccattggtttcaataag
gacttgaatagactggagattgatctgagcagtaatgagcttggtcaagaaggggcagat
gccgtcagcagctgtatctcgatgctcaacaatgtcacaacactcaatctccgtgacaac
ggcttcaacgttgccatggtatcattggttgcctggatgggacagaaccattccttggag
tgcattgacctcagtcaaaacatgagtccaagcagcaagaaagccgatagagagaaggta
gtcgttgctctggaagaaatgatccaaaacccagacctgcctctgcacaccatcctcctg
gctggcaacaggttccgtctggagacgcagcaattgatcaatgctttaggcagtaacacc
actctgctctcagtcgatctcagtggcaatgaaatgaaagacattggggcgcgactgctt
gccaaagcccttcagatcaacaacaagctccagacagtggtcattgacaacaacaacatt
ggcctacaaggtttccaggaccttgctcaagccttggagaggaactacaccttgaagagg
atgccgatcccaaccacggatatgatggcagccatgcagaagaaccacgagaagcatgag
aagacggaagcagccatccagaagatccaggaatgtctccagaggaaccacagtccaagg
aagttctccaacaaacaagcgttcctcttacaaaggggtttcctctatacaacagctcac
cagatggttgacaagttggttgtccacatagaagacatggctacagaactgacccagaaa
tcagatgcagatctgcaagagaagatcagcacagccagaggtctcatcgatgatgccaac
aactctaaaaagatatatgacgtcctccagaacgtagttggacgatcagatgacgaggat
ttgactgagaaactaagagagattgcttgccttatagaatcagaaatggaagcacgccta
gagcgtaatgccaatggcatggtagacgggaccagccaactatgtggctatgtgatgcaa
gatcgctgtctgtatgagaagatagaagatacatgtcgggagcattacagactacctcca
cgcttcgtagaggacctggtagatcagattagtgctgagactagcaatcaatgcagtgaa
gctaacctggccatggcatccttcatatcagattccatcttggatgaaattattgaacaa
ctctcaactgtggaagctgagctgtctgatgaactcaagaaattccgagatgaggtcgcc
aacgggacgacggtccggcaggtagagagcatctttgaagattcgagagaggaggaagag
gaggaagaagatgacagtaaagaggagcaggaggaggagaacgatgaagaaaagacagag
gagggacaggttcaaaatgaggagaaggagaacgtagagataaaaattgaggatgaaggg
tcagctgatggaagtgacaccaacgaggtagctcttcagaacggtggaaccgaggtatca
aaaacagatgatgacgcaggggcaagcagtggaggacaggctttgcctgtagcaagtcta
ccacaaatgaccaagaaacagaatatacgagtccagagagccaaaagcgttaaacgacct
gtttctgaattaccaactggaatccctgtgataccgatagatatagaggaggataaacca
gaagaaaggccaagtctcagtcctctaccagatgtacaattaccagaccttccagatcct
aatcagtcagcaaaagaagagacggactcatccaagagtttctcgacaccaaggagcaaa
cccaaaccaagcctactgaaacctccttcaaagtcaccaggttccacccccaagctcgta
gaatttgaaagtgtgtcgaaccaggcagcggcccctcttcgagatgttcgagcagatcgt
ccgagggttagccgtgcgatgagaccggcccgtgcccgacctgccccgcgtccatccgat
caaaaccctgaggggataattgaagaggaggatgatctttcaaaaatgtggagctcacct
actgttccagggtttgaaactcaagaaagcccatcatcaagcccatcaggatctcagact
agtctatctgaaagtaagaagtcagagaagaaaaatttcttgggaggcttgtttaggaga
aagaaggatgagaagaaggacagcaaaaaagactctgacaagaaagatagtaagaaagat
aagaaggaaacaaagaaggaaaagaaggaacgggaggatagggagaagaaggaaaaggaa
gagagagaaaggaaagaaaaggaacaaaaggagaagagcaagaagagcaagactccactc
acacccacttcctacaaaagtgagccagtaattgatgacattgatagagttagtaaagcc
gaacctaccacacctcgattcgacctatcccctgctcaggatactccatctgatgtgggt
gctgaaaaggagaaaacagactcaaccgaagctccatccaaacatgacacaacggaggat
caaccaaaagacaagatagaagagcttacacctgttgcgccacccaaaaaggcgctccgc
cctgtgaccggtgtcagcatgtttggagccgatgtcatgcagcagatgcagcagagaaga
atgttcaagtctgcaaataatgaggatgtaaaggaaactcctgagccaaagagtccaact
acagctcccaagccagccttcaggtcttcccctccgtcttcggaaaaagtgacccacaaa
cccttggtccttcctacttccccatcaaaaagtctttcctcaccaaacccatccccggct
gcttccccgctgtcgcccaaagccacttcacctggcccaacgtcaccaagaccagcgtcc
acgtctcccaaaccagttcctgctctcaggcccgttcccaagccaagaaagtctgaactt
ccaacaggtgccgacacaaaacccttagtcaaggaagtgaaagaggaagaagagaagggg
aaggggacagaagaggttgcaagggcaggatcggcaaagagtacatcagcagttgttcag
gagaagacagaggcagatgctgcaaaggttgacagcaaagaacagccacctgctgctgag
gaagacaccaagcctcttgaagaagcagttgcagccaagaagaccaaatcagaatcagat
gaagatgcctcagcagaaaagaagcaagtggaagagtctgtccaggaccaagcaaagaac
aaagaagaagataaaaaactggaggacagctcaaagacttctgaggaaaaggaagtagtt
gcaaaggagaagccacagaaggtagaagatagtcctgctgtcagtttggatggagacaag
aatgctgaaagtgacaaaacaaagggtccagaaagcactcctgaggactcgcttgtcagg
acagggtcaacatccagtgagaaatcttctccgctgatctcatcagggagtctgaaggat
gtggagaaaacgacagaacctgttattgcaccaaagaaagactcaataaagagcccctcc
ctacccatatcgccaaagtcaataggtacagatggctcaccaaagagattgtcttcgaaa
cccaagcctgctgtaccactttctactaaaccaaggccagcttccatctcaaagaagcca
gtgctccctccacccaaaccagatggcagcatagccgatcataggaggtctttgaaacct
gtcacagcaagaaaacctgaagcaaaagaaagaacatctcttataggattacacaactcg
ggtccaaaagagagcaatggtgagagcacggagagcataccaccaaaacctagtgatttg
aagagggcgtcaaagacgtccatcaacggacaaactcccaaggaatccaacaaaacagca
gtcacaccagtggaggaagaaaaggacgaaacgccaaaggagaaagaggccatctttgtt
tga
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integrated database retrieval system
