Lytechinus variegatus (green sea urchin): 121408030
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Entry
121408030 CDS
T11173
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121408030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121408030
Membrane trafficking [BR:
lvg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
121408030
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
121408030
NCBI-ProteinID:
XP_041455268
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All DBs
Position
2:complement(37644584..37680674)
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AA seq
797 aa
AA seq
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MPPTQAVGSEDQEKLLEEAQQVVKVQAFQMKRSLDKGKLMDGLKNASNMLGELRTSLLSP
KGYYELYMSVCDELRHLEQYLLDEYQKGHKIADLYELVQYAGNIVPRLYLLITVGIVYIK
AHQSSRKDIMKDLVEMCRGVQHPLRGLFLRNYLLQCTRNYLPDTEKDESDNPETAGGNIE
DSIDFILLNFAEMNKLWVRMQHQGHSRDWEKREKERNELRILVGTNLVRLSQLETVDVER
YKKDILPEVIEQVVSCRDTIAQEYLMECIIQVFPDEFHLQTLSMFLKACADLNTAVNVKN
IIIAMIDRLALFACRDDTAGIPSDLKLFDIFSLQIAGIIEARSDMPTEDIVALQVSLINL
ALKCYQDRVDYIDKVLETTAAIFEKLKLEHLKYNSAVAKELQRLLKIPVDSYNNILTLLK
LQHYVRVVEYLDYEGRKTISAYIINNAIDNNLPVPSQEQVDQILTLVAPLVKDQPDQPDE
EDPEDFAEEQGLMGRFINLLQAEDADQQYLILNTARKHFGVGGNKRIKYTLPPLTFSAFR
LAFRYKDLAEEDDKWEKKCQKIFTFCHQTITALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIATFERMSCFGEENHEPLRTQCALAAS
KLLKKPDQCRGVGVCSHLFWSGRSTESGGEEIHDGKRVAECLKKALRIANQCMDPTVQVQ
LFVEILNRYVYFYERGNDQITIPVLNQLLDKIREDMPNLEDNEETEQITKHYNNTIDHLR
NKQESGEDGPSFEGLAL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaactcaagctgtaggttctgaggatcaggagaagctgctggaggaagcccag
caggttgtcaaggttcaagccttccagatgaagagatctcttgataaaggaaagttgatg
gacggtttgaagaatgcatccaacatgcttggagagctacgtacgtctctcctctcaccc
aagggttactacgaactatatatgagtgtgtgtgatgaattacgtcatctagaacagtac
ctccttgatgagtaccagaaaggtcacaagattgctgacctctacgaactggtccagtat
gcaggcaacattgtccctcgactgtatctgctgatcacagtaggtatcgtctacatcaag
gcgcaccagagctctaggaaggacatcatgaaggacttggtagagatgtgcaggggtgtt
caacacccactcagaggactcttcttgaggaactatctcctgcagtgcaccaggaactac
ctgccagacactgaaaaagatgaaagtgataatcctgagactgctggagggaacattgaa
gactccattgatttcatcttattgaactttgccgagatgaacaagctttgggtgcgcatg
cagcatcagggtcactctagggattgggagaagagggaaaaagagcgtaacgagctccgg
atcctggtggggactaacttggtccgcctcagtcagctggagactgttgatgtggagagg
tataagaaggacatcttgcctgaagtgatagagcaggtggttagctgtagggataccatt
gcacaggaatatctcatggaatgcattatacaggtattcccagatgaatttcacctccaa
acgctgagtatgttcctgaaggcatgcgctgatcttaatactgctgtcaatgtcaagaat
atcatcatcgccatgatcgacaggttagcattgtttgcctgtcgcgacgacactgcaggt
atcccatctgatctcaaactatttgacatattctcgcttcagattgctggaatcatcgag
gcccgtagtgacatgcccaccgaggacattgtggccctccaggtttccctgataaacctg
gctctcaagtgctaccaggacagggtagattacattgacaaggttctagagacgacggca
gccatctttgaaaagctcaagctagaacatctgaaatacaacagtgccgttgccaaggag
ctgcagagactgctgaagatacctgtggattcctacaacaacatcctgaccctgctcaag
ttacaacactatgtgcgcgtggtggagtacctggactacgagggccgtaagacaatcagt
gcgtacatcatcaacaatgccattgataacaaccttcctgtgcccagccaagagcaggtt
gaccagatcttgacattggtggcgcccttggtgaaggatcagccagatcagcctgacgag
gaggaccctgaagattttgcagaagagcaaggcctgatgggaaggtttatcaatcttttg
caagcagaagatgcggaccaacaatatctgattttaaacacagcaagaaaacattttgga
gtaggaggaaacaagaggataaagtacacattaccacccctgaccttctctgcattcagg
ttagctttcagatacaaggatttggctgaagaggatgataaatgggagaagaaatgccag
aagatcttcacattctgccatcaaaccatcacagctctgatcaaggccgagctagcggag
cttcctctacgactgtttttacagggcgccctcgctgccggggagattggttttgagaac
catgagactgttgcttatgagttcatgtcacaggcattctctctgtacgaggatgagatc
agtgactccaaggcccagttggctgccatcaccctcatcatagcaacctttgaacgcatg
agctgcttcggggaggagaaccacgaacccctccggacacagtgcgccctcgccgcttcc
aagcttctcaagaaacccgaccagtgccgtggggtcggcgtctgctcccatctcttctgg
tctggaaggagtacggagagcgggggtgaagagatccatgatggtaagagagttgcagag
tgtctcaagaaagccttgaggatcgccaaccaatgcatggaccctactgttcaagtacaa
ctctttgtagagatcctcaacagatatgtctacttctatgaacgtgggaatgaccagatc
acgataccagtgctgaatcaactccttgacaagatcagagaggacatgccgaaccttgaa
gacaacgaggaaacagaacagatcaccaagcactacaacaacaccatcgaccatcttaga
aataaacaggagagcggagaggatgggccgtcattcgagggactggcgctgtag
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