Lytechinus variegatus (green sea urchin): 121408181
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Entry
121408181 CDS
T11173
Name
(RefSeq) heparanase-like
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00531
Glycosaminoglycan degradation
lvg01100
Metabolic pathways
Module
lvg_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
121408181
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lvg00536
]
121408181
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
121408181
Glycosaminoglycan binding proteins [BR:
lvg00536
]
Heparan sulfate / Heparin
Enzymes
121408181
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GFIT
Motif
Pfam:
Glyco_hydro_79n
Thr_dehydrat_C
Motif
Other DBs
NCBI-GeneID:
121408181
NCBI-ProteinID:
XP_041455476
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All DBs
Position
2:47034537..47047098
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AA seq
559 aa
AA seq
DB search
MMTGDSRVAMVTSSLLMMVVVMIFIIDNEDTSVKERDTRREVLASKQYRSLSDLEYAGEG
RSYARLTINTSNVVATVDERFVSVGATMGSFNRSLGQHFNSTRFWTAARGLAPAIYRMGG
AEADFTYFDAHNTRDECLQNGKLKENRKLDNYGKLTFFNMTLCAHTWDNINEFARSVGWQ
ILFCLNALTRNKTSWDPTNALEMINYTHNRGYQVLWGLGNEPNGYLRKANVAVNGTQMAD
AFHTLRKEVRRLSGQSDFFLVGPDTSAPIKKENELTSTKPYLEDFLKEVGNATNVTSFHY
YYTSGRTANFQNVTDPKVADMLIPNIESVRGSVAKYGSAYNSRVWISESGLTFGGAPSGL
SARYVLGMMMLDKLGVSARYGIELIVQQGLIGKTGGLFDAAYKPRLPYWWFLYHKRLMGT
RVLDVSKAVSTINTVLKHNDDDFSNHVRVYAHCTKTSTFYHPGSVTLMIINMIPIFEVHV
HLEAPLQNTTIHEYLFTPLGAQSILSPHGKLNGRRLKMVSDYTLPDYTPRERPPGSTIVL
PQQSFGFYVLPNAQASVCL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgggcgattcccgcgttgccatggtaacctcatcgttattaatgatggtggtg
gtgatgattttcatcatcgacaatgaagatacatcagtgaaagaacgtgatacacgacga
gaagtcctcgcttccaaacagtacagatcactttcggacttagagtatgcaggcgaagga
agatcgtatgccagactgactatcaacacatcaaatgtggtagcaacagttgacgagcgt
ttcgtatcggtgggggcaacgatgggtagcttcaatcgttcacttggtcaacactttaat
tcaactcgtttttggacagcggcacgcggacttgctcctgctatttatcgcatgggcggg
gctgaggccgattttacttactttgatgctcataacacaagagatgaatgtcttcagaat
ggaaagttaaaagaaaacagaaaattagataactatggaaagttgaccttctttaatatg
acactttgtgctcacacttgggacaatatcaacgagtttgctcgatctgtcggatggcag
attttattttgtcttaatgctctcactcggaataagacatcttgggaccctaccaatgcc
cttgaaatgatcaattacacccataacagaggttatcaagtcttatggggcctcggaaat
gaacccaacggatatttgagaaaagccaatgttgcagtgaatggaactcagatggccgat
gcatttcatacgctcagaaaggaggttcgtcgactatccggtcagtcggatttcttctta
gtcggccccgatacatcggcaccaataaagaaggaaaatgagctcacaagtactaaacca
tacctcgaggatttccttaaagaagtcggaaatgcaaccaacgtgacctcgttccattac
tactataccagcggtagaactgccaacttccaaaacgtgacagatccgaaagttgccgac
atgttaatacccaatatcgagagcgttcgggggtcggttgcaaaatacggttctgcatat
aattcaagggtgtggatatccgaatctggtcttactttcggcggagccccatcagggttg
agtgcaagatatgtcctcggaatgatgatgcttgataaacttggagtatcagcccgttat
ggtattgagctcatcgtccagcagggattaatagggaaaacaggaggactatttgatgct
gcatacaaaccacgtctgccatattggtggtttttgtaccacaagaggcttatgggaacc
cgggtgttagacgtttctaaagccgtttctacaatcaacacagtactgaaacacaatgat
gatgacttttcaaatcacgttcgggtatacgcgcattgtacaaagacaagcaccttttat
cacccaggctctgtgacattaatgatcataaatatgatacccatcttcgaggttcatgtt
catctggaggcacccctgcagaatacaactattcacgagtacctcttcacgccgctgggg
gcgcaaagcattctttcaccacatggtaagctgaacggtcgacgactcaaaatggtcagt
gactacacgctacccgactatacgcccagggagaggcctccaggcagcaccatcgtgcta
ccacaacaatcattcggcttttatgttcttccaaatgcccaagcttctgtttgcctatga
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