Lytechinus variegatus (green sea urchin): 121408383
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Entry
121408383 CDS
T11173
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvg03009
]
121408383
Enzymes [BR:
lvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121408383
Ribosome biogenesis [BR:
lvg03009
]
Eukaryotic type
90S particles
Helicases
121408383
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
121408383
NCBI-ProteinID:
XP_041455777
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All DBs
Position
2:54092224..54125756
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AA seq
602 aa
AA seq
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MDVFRQLGAGAKFDLKRFRSDAEKFQIIKPTGKQLPQQDIIKALDIFGNNKRSLDETHKI
NATKKQKVSAGETVTTSEHGNSKGSGRTEKIKAIRKRNRIHVQGEDIPDPVETFGELQEE
YGLSDDVIQNIMEVGYHAPTPIQMQAIPILMHRRELLACAPTGSGKTAAFLLPVIHQLKG
PQKKGFRAVVLSPTRELSQQTYRELMRLSKGSGLRVHTIENGAKAAQKFGPHTAQKFDIL
VSTPNRLVYLLQQDPPAIRLNNVEWLIIDESDKLFEEGKTGFRDQLGIIYQACDSSQVRR
AMFSATFAFDVQQWCRMNLDNVVTVSVGARNTANEKIDQELTFVGSESGKLLAVRNMFSK
GFVPPVLVFVQSKERAKELFQELIYDGYNVDVIHSDKTQTQRDNIVKAFRAGKIWVLIAT
ELMGRGIDFKGVNLVINYDFPTSAVSYIHRIGRTGRAGRNGRAVTFFTEDDTIHLRSIAN
VMRNAGCPVPDYMLQIRKLSKRKKRSLERNPVKRDTIRTLPKDELRKAKRKTELMKRKHG
KKQSSISESNTEKDQLNDSAPPKSKRRKGEKEDVNKSERISEGTSGKKKKQKVKKKKKKP
AL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctttcgccaacttggagctggtgcaaaattcgatttgaagagattcaggagt
gatgcagaaaaatttcagattataaaacctactgggaagcagcttccacaacaagacatc
attaaagctttggatatctttggaaacaacaaaagaagcttggatgaaacacataaaata
aatgccacaaagaaacaaaaagtttctgctggtgagacggttacaacaagtgaacatggt
aattctaaagggtctggaagaactgaaaagataaaggcaatccgcaaaaggaatcggatc
catgttcaaggggaggatattcctgacccggtggagacgtttggagagctgcaggaggaa
tatggactctctgatgatgtcatccagaacattatggaggttgggtaccacgcgcccacg
ccaatccagatgcaagccataccaatacttatgcatcgtcgtgagctcctagcatgtgca
cccactggctcaggaaagacagctgcctttctgctgccagtaatacatcagctaaagggt
ccgcagaagaaaggtttccgtgctgtggtgctttcgccaacgagggagctctctcaacag
acatacagggaattaatgagattatccaagggcagcggactccgcgtacacaccatcgaa
aatggggctaaggcagcgcagaagtttggacctcacactgcacagaaatttgatatcctt
gtctcaacacccaacagattggtttaccttctccagcaagatcctcccgccatcagatta
aataatgttgaatggctgattatagatgaatcggataagcttttcgaggaggggaaaacc
ggcttcagggatcagcttggaatcatctaccaagcctgtgactcgtctcaagtccggcgt
gcaatgttcagtgcgacctttgcctttgatgtacagcagtggtgcaggatgaatctcgat
aatgtagtgacggtcagtgttggtgctagaaacacagccaatgaaaaaatcgatcaagaa
ctgacctttgtcgggagtgaatcgggaaagcttcttgctgtacggaatatgttcagtaag
ggctttgttcctccagtcctggtctttgtacagtctaaagagagggccaaagaactgttc
caggaactgatttatgatggttataatgtagatgtcatccactctgacaagacacaaaca
cagagggacaacatcgtgaaggctttccgagcgggtaagatctgggtgctgattgccact
gaactgatggggcgtggcatagacttcaagggcgtcaaccttgtcatcaactatgacttc
ccgacgtcggcggtcagttacatccaccggataggacgaacgggaagggcggggcgcaac
ggaagggcagtcacattcttcacagaagacgatacaattcacttacgaagcattgccaat
gtgatgcgtaatgcgggctgcccagtacctgattacatgctgcagattaggaaactgtca
aagagaaagaagcgatccttagagaggaatccagtgaaacgggataccatcagaacactc
cctaaagatgaactacgcaaggcaaagagaaaaacggagttgatgaaaaggaaacatggc
aagaagcaatcttccatctcagagagtaacacagagaaggatcaattaaatgattctgcg
ccaccaaagtcaaaaaggaggaaaggagaaaaggaagatgtgaataagagtgaaagaatc
agtgaaggaacatcagggaagaagaagaagcaaaaagttaagaaaaagaagaagaaacca
gcattatag
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