Lytechinus variegatus (green sea urchin): 121408385
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Entry
121408385 CDS
T11173
Name
(RefSeq) ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121408385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121408385
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121408385
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
HECT type E3
121408385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF4809
Motif
Other DBs
NCBI-GeneID:
121408385
NCBI-ProteinID:
XP_041455779
LinkDB
All DBs
Position
2:54165210..54200066
Genome browser
AA seq
1068 aa
AA seq
DB search
MFSQKDTSKKSELLDKAKSSRTERALLRKKEQSVVRIQSLVRGFVCRRRYKRAMLQDIDK
ILDANPGSPDNPDAITHFFPAAEVYTAIKRFLYIYDEKKDLKRFEKICRYLTASMESSKD
AKVWYVSLALTKEYVLPWIQQLKQILWLCASQLKKLKPDLPIAAKSIALHLHMLITFTDT
ATWKIFQIPKADALRASMGQICSNVMGHLVAKGLYPVIHTLLKEGLTKRQPALSPTILNA
TMVVAWRPLVAGNFSSNLLCIFISHVLPVPGLFSHLSVAKAETLTAMKNSALLPHCLKYL
STEGGCRSILSMVDATYSLCLLANMVHLAHLDNESLINNLQIFMNVTTTLLNHCQAFVGK
KKSNTTSWHPVLGWFSQPFDNRLQEAMGFVTQQLQHLWGQTILQTCVLGVLKGPQPEEVS
SHLDGKTPNKGGNILKKLQRMTSKLGNQKSCKSLSSQEVIIVCSLCSMYQTALSTLTELR
RDILTGLSYRDLLLPRLWRFIAELGPHGGLRVFQDCLASSPSDQQSILSVLMLFCDSASY
LIAILDDGEFYDQQIPFHPEDLLAVSSFLNLFVFKVIWEHNLDENPKLQSLFSSTHTLLM
LLYDKDCRRQFAPSSHWLVKDLKMSSFKSELEKSSKRADLILQKIPHVIPHRERVILFRK
RVSDEKKTLGYTESPMSQPHSTYITVHRNRLVEDGYQQLASVPSQSLKGCIRVNFINEQG
LDEAGIDQDGVFKEFLEETIKTVFNPSLNLFKTTAEQRLYPSPTSYINENHLPLFEFVGK
MLGKAVYEGIVVEVPFAHFFLSQILDHNHSTLYSPIDELPSLDKELYKNLTFVKHYDGDV
ADLDLGFSLDEDFMGKLVTHELIPGGKAITVNNQNKIKYIHLMAHFRMCHQIRDQTRAFK
RGFLSLINPQWLAWFSGPEVQRLISGDVNALDLSDLRKHTQYYGGFHNSHRVINWLFDIL
SNDFNIQERGLFLKFVTSCSKAPLLGFAHLEPPFSIRCVEVSDDQDTGDTVGSVLRGFLR
IQRRDPVSRLPTSSTCFNLLKLPNYQKKSTLKEKLRYAITSNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtcaaaaagatacctccaagaagtccgaactcttggacaaggcgaaatcctct
cgtactgagcgtgctctccttcggaagaaagagcaatctgtggtcaggatacagtctctt
gtgcgaggttttgtatgccggaggagatacaagagagccatgttacaggatattgacaag
attctggatgcaaaccctggtagcccagacaatcctgatgcaatcacacacttttttcca
gctgctgaagtttatactgctatcaagaggttcctttacatatatgatgagaagaaagat
ttaaagagatttgaaaaaatctgcagatacctgactgctagtatggaatcaagtaaagat
gcaaaggtgtggtatgtttcactggctcttaccaaagaatatgtgttaccgtggattcag
caactcaaacagatactatggctctgtgcatcacaactcaagaaacttaagcctgacttg
ccaattgctgccaagagcatagcccttcaccttcacatgctcatcacattcacagatact
gctacatggaagatatttcagataccaaaagctgatgccttacgagccagtatgggacag
atctgttctaatgtcatgggccatcttgttgccaagggactgtatcctgtcatccataca
ttgctcaaggagggcctgacaaagcgacagcctgctctgtctccgacaatccttaacgcg
accatggtggtagcgtggaggcctcttgtagctgggaatttctcttccaatctactctgt
atctttatctctcatgttctccctgtgcctggcttgttcagccatctttctgtagctaaa
gcagaaacgctgacagcgatgaagaacagtgccctcttgcctcattgcctgaagtacctc
agcacagaaggaggatgcaggtctatcctgtccatggtggacgctacttattctctctgt
cttcttgcaaacatggtccatctagctcatcttgataatgaaagcctgattaataatcta
cagatattcatgaatgtgacaaccacgttattgaaccactgccaggcgtttgttggaaag
aagaagtcgaacaccacatcatggcatcctgtgttaggatggttctcacagccgtttgat
aacaggttacaggaggccatgggctttgtgacgcagcagttgcagcatctgtggggtcag
accatacttcagacttgcgttctgggtgtgctcaaaggacctcaaccagaagaggtctcc
agccatttagatggcaagactccaaataaaggtggcaatattctgaagaaattgcagcgc
atgacatcaaagctgggaaatcaaaagtcatgcaagagccttagctcacaggaagtgatc
attgtgtgttcgttgtgttccatgtatcagactgctctcagtacattgaccgaactcagg
agagatatactaactggcctgagttatcgggacctgctcctgcctaggctgtggagattc
atagcagaactaggtcctcatggtggtctcagagtgttccaggactgtttggctagtagt
ccatcagaccagcagtctattctctctgtgctaatgctcttctgtgatagtgccagctac
ctcattgcaatcttggatgatggagagttttacgatcaacagattccatttcatcctgaa
gatcttctagcagtgtcttcatttctcaaccttttcgttttcaaagtcatttgggagcac
aatttggatgaaaatcctaagctgcagagtctattcagctcaactcacaccctactaatg
ttgctctatgataaagattgtagaaggcaatttgctccttcctcacattggcttgtcaag
gacctgaagatgagctcgttcaagtccgaactggagaaaagctcaaagagagcagatctc
atccttcaaaaaatacctcacgtcattccacacagagagagagtgatattattcagaaaa
cgagtgagcgatgagaagaagactctaggttatacagaatccccaatgtcacagccgcac
tcgacatacatcacagtacatagaaataggcttgttgaggatgggtatcagcagcttgca
tcagtgccatctcagtccctcaaaggctgtatcagagtcaacttcatcaatgaacagggt
cttgatgaagctggcattgatcaggatggtgtcttcaaagagtttttggaagaaactatc
aagactgtcttcaacccttccttaaacctgttcaagactacagcagagcaaagattatac
cccagcccgacatcatacatcaatgaaaatcatcttcctctctttgagtttgtgggcaag
atgctcggtaaagctgtctatgagggtattgtggtggaggtgccgtttgctcacttcttt
ctgagtcagatcttggatcacaatcacagtactctctacagtcccatcgatgaactgccc
tcgcttgacaaggaactctacaagaatctcacgtttgtcaagcattatgatggtgacgtg
gctgatttagatcttgggttttcattagatgaagacttcatggggaagcttgtcactcat
gaattgattccaggtgggaaggccattacagtcaacaaccaaaacaagatcaagtacatc
catctgatggctcactttcgcatgtgccatcagatccgggatcagacccgtgccttcaag
cgaggattcctctccctcatcaacccccaatggttagcttggttctctggtccggaagtc
cagagactcatctcaggagatgtaaacgccctggacttgagcgatctcaggaaacacaca
cagtactatggaggttttcataattcccacagagtgatcaactggctttttgatatcctc
agcaatgactttaacatccaggagagggggctctttctcaagtttgtgacaagttgttct
aaagctcctctgcttggatttgctcatttggaaccaccattctcaataagatgtgtggaa
gtcagtgatgatcaggacactggggatacagtcggaagcgttctgcgtggctttttacgc
atccagcggcgcgaccctgtcagccgcctgccgacctcatcgacgtgcttcaatctcctc
aagctaccaaactatcaaaagaagagcacgctgaaagagaagctgcgttatgcaatcacc
agcaatacaggatttgagttatcatag
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integrated database retrieval system
