Lytechinus variegatus (green sea urchin): 121408398
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Entry
121408398 CDS
T11173
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121408398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121408398
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121408398
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121408398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-rbx1
WWE_5
zf_RING_Vps8
zf-RING_11
zf-C3HC4_2
zf_RING_Vps8_fungal
ZNF512_C2HC
PHD
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
121408398
NCBI-ProteinID:
XP_041455804
LinkDB
All DBs
Position
2:55184215..55232762
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AA seq
699 aa
AA seq
DB search
MNEDQNNMDEDDVVVWEWFSDHGRWRAYDPSVVVELEAAYGRETTLALADVDPALSSYEI
DFSAMQQYRTTSGNARPIRRRTLPGSSPAGQGVEWQWEDNSGWIQYDLDTSTIVEDAYSK
KLHSIDLSRTRCHLPYIIDFTQMMQIRRTSGFKRKLRRVVLAESYPKVTNVVSPIEVSSG
SESPELSAVLEVDPGVVDEAVVKESENANVTLESCQIQMTDDVGGEQLSEAVELSRPTSL
SLSEPIKETDIDSVISPSPATSTTPNVPQVVEPTSTGTATQRAGKRTHSKRSSSRKAVAA
TRDVQATVAWTSPGDADVASTSSAGSSTGSAGRSSLPRSVSVPASMASGQSSEGSKKHTT
ASPSSGSGLGMPPLTQSATMSQLATAAAATTSRMRKSHSTPCTIQTRTANAAGARLSPVM
TAMTSILLSTALPVKLVPVRTPIYSPPNSGGIRPVEGLKPRKKKRKISLRGKTAEEVIGK
YVEKEESPPDEECPICFEKLCNISHYNEDEEEGESVLKLDRCGHLFHQSCLYAMYNSGPK
DGSIQCPTCKAIYGVKCGNQPPGSMDYHVIPHSLPGFSSCGTIRIIYNIPPGTQGQEHPS
PGRRYSSRGFPRMCYLPDNEIGRKILQLLIIAWDRRLIFTIGTSVTTGEPNTVVWNEIHH
KTEFGSNVTGHGFPDPNYFTNILGELASQGVTEDCLDDC
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggaccaaaacaatatggacgaggacgatgttgttgtgtgggaatggttttcc
gaccatggacgatggcgagcttacgatccgtccgtggtcgtcgaattggaagcggcatat
ggcagagagactaccctggccctggcggatgttgacccagccttgtcatcttatgaaata
gatttttcggccatgcaacagtatcggaccacgtcaggcaatgccaggccaatcaggaga
aggacgctaccaggcagttcaccagcaggacaaggtgttgaatggcagtgggaagacaac
agcggatggatccagtatgacctagacacaagtacaatagtagaggatgcctacagcaag
aaattgcactccatagacttgtcaaggaccaggtgtcacttaccttacatcatagacttc
actcagatgatgcagatacgtaggacttcagggtttaagcggaaactacggagggtggta
ctagccgagtcatatcccaaggtgaccaatgttgtgtcaccgatcgaggtatccagtggt
agtgagagtccagagctgagtgctgttttagaggtggacccaggagtggttgatgaggct
gttgtgaaggagagtgagaatgcgaatgtgacgttagaatcatgccagattcaaatgaca
gatgatgtaggtggagagcagctttcagaagctgtagaactatcccggccaacatcgtta
tcactatcggaacccatcaaagaaacagacatagacagtgtaatttcaccaagccctgcc
acatcgacaacaccaaatgtgcctcaggtagtggagccgacatccacgggaactgcaacg
cagagagcgggaaagagaactcacagcaagcgatcttcttctcgtaaagccgtggccgcg
acaagagatgtgcaggccacagtagcatggacgagtccaggagatgcggatgttgccagt
acaagttcagcaggttcctctacaggaagtgcagggagaagcagcttaccaagatcagtg
agcgtaccggcatccatggcttctggtcagtcaagcgagggcagcaagaagcacaccacg
gctagtccaagctctggttcaggtctaggaatgccacctctcacccagagtgcgaccatg
tctcagctggccactgcagctgctgctacaacatcaaggatgagaaagtctcactcgaca
ccctgtaccatccagactaggacagccaatgcagcgggtgcaaggctcagcccagttatg
acagctatgacgagcattttgctctccacagccttgcccgtcaagctggtacccgtcagg
acacccatctactccccgcccaactctggagggatccgcccggtggaggggctcaaacca
cgcaagaagaagaggaagatatcgctcaggggaaagacggcggaggaagtgattgggaaa
tacgttgagaaagaggagagccctcctgatgaggaatgtcctatatgttttgagaagctg
tgcaatatatcacattacaacgaggatgaggaagagggagaaagtgttcttaaactcgat
agatgcggtcatctttttcatcaaagctgtctctatgcaatgtataacagtggaccaaag
gatggtagtatacagtgtccgacctgtaaagccatttatggtgtgaaatgtggcaatcaa
cctcctgggtctatggactatcatgtcataccgcattccctcccaggattctcatcatgt
gggactatacgtatcatctacaatataccaccaggaacacagggtcaggaacatccaagt
cccggcagaagatattcatctaggggattccccagaatgtgttatctaccagacaatgaa
ataggaagaaagattctccagcttctcatcattgcatgggaccggcggctcatcttcacc
atcggcacctcggtcacgacaggggaacccaacaccgtggtctggaacgagatccaccac
aagaccgagtttggttccaacgtgacgggccacggcttcccggaccccaactactttact
aatatcctaggagagctggcgtcgcagggagtaacggaagactgtctggatgattgctga
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