Lytechinus variegatus (green sea urchin): 121408513
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Entry
121408513 CDS
T11173
Name
(RefSeq) rab GTPase-binding effector protein 1-like isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121408513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121408513
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121408513
Protein recycling
Rab4 associated proteins
121408513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab5-bind
Rabaptin
FYVE
FPP
betaPIX_CC
PspA_IM30
IBR
Motif
Other DBs
NCBI-GeneID:
121408513
NCBI-ProteinID:
XP_041455929
LinkDB
All DBs
Position
2:complement(59814671..59852328)
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AA seq
997 aa
AA seq
DB search
MSSHDQNTFPARHMDIEGEVLSVQQRVGDLESSLQAVLQEKKLQEEDFAQKRAKFKELYL
SREQELIKEVDNVREEKDRLSEELAGLKAAASVIESSKDEEIAQIKQKWTDEVASLQQIV
SHTAAITAEETAMTYLMERDKLLALNEKLTQELQEISQNQGGEKTMTSSGSAGLLTSMTK
SFRSLTSATTSPSPTREEKLPLPQTPSSPSASDNLEQSMLKAQKDTELLRAVVVPLENEI
ESLKQKLSDVHSDNRLLQARLKKAIGSKDFSDAVPSADDCEVTKDDINILNEKIKDLNKV
LETEKAARTDLELYVAVLGKQKQVMQDEGDEMRTELKDVCCILEQEKQAHSQLQQTWQMA
NDQFLESQRLQMMDMRRMESVLTEEQQRQIAELLKKDQEREEQEKKVKVLKEKRENLEKR
HSKETAEQEVTQQASPAPVQTNSSSLLSRDDIEDSDDALLVPSSMDTPISSTPSRLHPSI
NFVSPNVDPEALLQFDTTDSASGAKSTVHGSLSEIGAQSGHNTSDLLGTSYDSVSLSSTI
SLTEAQERAISGTPESEEMKSVLASARSKTDLYSLLAGKRVVSDTEWTKIQEEIRFAREK
LGRPCDMCTNYEQQLQGLQTKYSESVESSRTLRQQLEQEIDNVLREQKIRSELEESLKNA
AEDAQIQIKTLTTKNGESEQLLSNIRHQYLKSQNELHSQMQILFESREQLYQEVTKLQKE
NDSLSAKRSLHQSLQSSEPFDLPTSPQELSRLCMKYRDDIITVRVNADHTESSLRSELSF
TREQLESEQHQRMTMEDTYQTELDDYKEELLVLRNLREDYEKEKKTRGEVEETLREVQES
KKSMQGKSKEVITALREQVEELSAHKTNLEAELQERRKKNQNLQSELENSEAVQKDFVKL
SQSLQVQLEVIRQKDNEVRWQHEDDADKCNNCKTVFGTSKKKKNHCKHCGKVFCPDCVTK
SVESGPRRRKMPVCDVCHTLLVNESAPYFSKEAPDNT
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcacgatcaaaatacttttccagctcgccacatggatatcgaaggggaagta
ctcagtgtccagcaaagggtaggtgatctggagtcttctctacaggctgtcctgcaagaa
aagaaacttcaagaggaagactttgctcaaaagagagcaaaattcaaagaactttacttg
tccagagaacaggaactaatcaaggaggttgataacgtccgagaggaaaaggatagattg
agtgaggaattggctgggctaaaggcagctgcatctgtcattgaaagcagcaaagatgag
gaaattgctcagatcaagcaaaagtggaccgatgaggtcgcatcactccaacaaattgtt
tctcacacggcagcaataactgcagaggagactgctatgacttatctgatggaaagagac
aaactccttgcacttaatgaaaaactcacacaggagctacaagaaatcagtcaaaatcaa
gggggagaaaaaacaatgacatcgtcaggcagtgctggccttttgaccagtatgacgaaa
tcattccgcagcttgaccagcgccaccactagtccatctcctaccagggaagaaaagctc
cctctaccccagaccccaagctccccttcagcatcagacaatctggaacagagtatgtta
aaggcacagaaagataccgagctgcttcgagccgtggtagttcccctggaaaatgagatt
gaaagcctcaaacaaaaattatcagatgtacacagtgacaacaggcttctgcaagcgagg
ctaaagaaagctattggcagcaaagacttcagtgatgcagttccatcagccgatgactgt
gaagttaccaaggatgatattaatattctcaatgagaagatcaaggacttgaacaaggtg
ttagagacagagaaagctgcaaggacggatttagagctgtatgtcgctgtgcttggcaaa
cagaaacaagtcatgcaggatgaaggagatgagatgagaactgaactcaaagatgtgtgc
tgtattctagagcaagagaaacaagctcactctcagctccagcaaacctggcagatggcc
aacgatcagttcctagaatctcagaggttgcagatgatggacatgaggaggatggagagc
gtcctgacggaagaacagcagagacagatcgccgagctcctgaagaaggaccaggagcgt
gaggagcaggagaagaaggtcaaagtcctgaaggagaagcgagagaacctggagaaaaga
cattccaaggagaccgcagagcaagaagttactcaacaagcatcgcctgcacctgtacaa
accaactcatcttcccttctgagtagagacgacatcgaggacagcgacgatgctctcctg
gtcccctcctccatggacacgcctatcagctccacaccttcaagactccatccatctatc
aactttgtcagccccaatgtcgacccagaagcactgttacaatttgacactacagactcg
gcttcaggagccaagtcaacagttcatggcagcttatcagagattggagctcagagcgga
cacaatacgtctgatctcttgggcaccagttacgattctgtttcgctatcatccactatc
agtttaacagaggcacaagaaagagctatctcaggaactcctgaatcagaggagatgaag
agtgttttggccagtgctcgctctaagactgatctctactccctgctggcaggcaagaga
gtcgtcagtgatactgaatggacaaaaatacaggaagagattcggtttgctcgggagaag
ttaggaaggccatgtgacatgtgtaccaactatgaacagcagctgcagggccttcaaact
aaatactctgaatcagtggaaagttcaagaacacttagacagcaacttgagcaggagata
gacaatgtattaagagaacagaagatccgttcagagttggaggaaagcctgaagaatgct
gcagaagatgctcagatacagatcaaaacactcaccaccaagaacggagagtcggagcaa
cttttatcaaatattagacaccaatatttaaaatcacaaaatgagttacattcccaaatg
caaattctatttgaatccagagaacaactttaccaagaagtcacaaagttacagaaagag
aatgacagtcttagtgccaaaaggtctttacatcaatcccttcaaagcagcgaaccgttt
gacttgccaacatcaccacaggagctttcccgtctgtgcatgaagtaccgtgatgacatc
atcacagtgcgggtgaatgctgaccatacggagagctcgctgaggagtgagcttagcttc
accagggagcagctggaatcagagcaacatcaacgcatgaccatggaggacacctaccag
actgagctggatgattacaaggaggaactacttgtattacggaacctgcgagaagactat
gagaaagagaagaaaactagaggagaagtggaagaaaccttgagagaggtccaggaatca
aagaagtctatgcagggaaagtctaaagaggtcatcactgcacttcgggaacaggttgaa
gaattgtcagcacataagacaaatttagaagccgaattgcaagagaggaggaaaaagaat
cagaatctacaatcagagctagaaaactcagaggctgtgcagaaagactttgtcaaatta
tcacaatctctacaggttcagcttgaagtcataaggcagaaagacaatgaagtcaggtgg
cagcatgaggatgatgctgataagtgcaataattgtaagactgtctttggaactagtaaa
aagaaaaagaaccactgtaagcactgcggtaaggtgttctgcccggactgtgtgaccaag
tctgtggagagtggccctcgaaggagaaagatgcctgtttgtgatgtctgccatacgcta
cttgtcaatgaatcagctccttattttagcaaagaagcaccagacaacacgtag
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