Lytechinus variegatus (green sea urchin): 121408520
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Entry
121408520 CDS
T11173
Name
(RefSeq) sphingomyelin phosphodiesterase 4-like
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00600
Sphingolipid metabolism
lvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121408520
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
121408520
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Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
121408520
NCBI-ProteinID:
XP_041455939
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All DBs
Position
2:60072538..60101204
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AA seq
896 aa
AA seq
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MAASMSWDRLRRGVSTSPKPVEKSSSLTGQVQSLCGLHYPLRTRCFELESLIRRSSSKDL
HSIYTLFLDLVFGLNGHPGWGLHTLNCQYSKDDFKVLQDFMSPNGPVFLMVYKLQGDHYL
RYEFPVEKLPAPTRASLADGIVPPFYQGKLAYQSHGRTPSVVMLNAFEYFMYVFAYYLVS
EKVHKTMNNWSQPQDYFYPVLLDQYLCYFLRSDGRAVPPIPVTSSAPNPAANRMSPYRLP
QYGVLYHYLHSSPYGGGDGGHPNQRSPTQHHDTTLGLHHQGLSPAGGLGRGMGAAAGISF
QQPIQDDPQVETWRSEVLVQALTEFWLNQNSLQLAEDKSFLAQVRENFIPSPDHVRMVRI
LVKRLHFFVNSARPMMHQSAYQQGGESAMEELKRYIMTVFVQKPLYVFLRHGFDNWPLDS
SFRQILELWLSYIQPWRYVEETNRTGFFQRDINSPLRSHLGSSIGQGMAQQREPISTRSF
PADDERWPRFVQENLPFYTVLFQELLPRIFHQDLSIPNNALMVYRMAKVFGQPHLSSVMK
NAEENLIDLLSHPSQPYTSGGGGGLGTNPSFMSLSSSIPSSTHLPPTLLAMGTRLYTHLL
EKEAPGFMYRPLFDSSGKAMIEQLLGFIAQAQTTVKTMAGPSLGDITQTIKSFFTSSLRH
ANHSALFDDIGPVDTRKAEAYLQSSGEFLSDIFDVPLPHPDDTMAWNVGQIGRDQHLPPD
MMDGQLTPLGRFQLINRLRSSDVNFQGDPDLQPIRSYENAALVRMLHALSCQFNDAFGDK
LLEICSQGGLLGAMARWYFNPRGNPHCHPTDPSGRVPSWYRPRLSLRFLANYRTLTYLAI
LYLLLVYFCDIMPTGFVAFLLAAALFVGFLGSLFTYLRGDEREEVYLQHYHHQHGD
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatccatgagctgggatagacttcgtcgaggcgtttctacttcccccaaaccg
gtagaaaaatcgagttctttgaccggccaagtacagtcattgtgtggcttgcattaccct
ctacgaacacgatgttttgaattagaaagcctcatcaggagatcctcaagcaaggatctg
cacagcatatataccttgttcctagaccttgtgtttggactgaatggccatccaggctgg
gggcttcacaccctgaactgtcagtactccaaagatgatttcaaggtcctccaggatttc
atgtctcccaatggaccggtcttcctcatggtctacaagctacagggtgaccactacctg
agatacgagtttcctgtggagaaattaccggcccccacaagagcatcattggctgatggt
atagtacctcctttctaccaaggaaagctggcataccagtctcatggaaggacgccctct
gttgttatgcttaatgcatttgagtacttcatgtacgtctttgcgtattatcttgtcagc
gaaaaggtgcataagaccatgaataattggagccagcctcaggattacttctacccggtg
ttgttagaccagtacctgtgctacttcctccgtagtgatgggcgcgctgtgcccccaata
cccgtcacaagcagtgcccctaatcctgcggccaaccgaatgtctccttatagactacct
cagtacggagttctttatcattacctgcattccagcccatatggtggtggagatggaggg
caccccaatcagcgcagccccacccagcaccatgataccaccctaggcttgcatcatcag
ggtctgagccccgctggagggttgggtagagggatgggtgcggcagcgggaatcagcttc
cagcagcccatccaagatgatccgcaggtggagacctggcgctccgaagtcctggtccag
gctctgaccgagttctggctgaatcagaactccctacagttggccgaggataagagcttc
ctggctcaagtcagggaaaatttcatcccaagccctgatcatgtgcgaatggtacgcatc
ctggtgaagaggctgcacttttttgtaaacagtgctcgtcccatgatgcaccaatcagct
taccagcagggaggagagtcggctatggaggagctgaagaggtacattatgacagtcttt
gtacagaagccgctttatgtgtttctaagacatggctttgataattggcctcttgactca
tcattcagacagatcttggagctttggttgagttacatccagccatggaggtacgttgaa
gagacaaacaggacaggtttcttccagagggacatcaactcgcccctgaggtcacaccta
ggttcatccataggccagggcatggcccagcagagagaacccatcagtacaagatcattc
cctgctgacgacgaaagatggccaaggtttgttcaggagaatctaccattctacaccgtg
ctctttcaagaactgttgcctcggatcttccatcaagacttgagtattcccaacaatgcc
ctgatggtttacaggatggcaaaggtctttggacagccacacctcagtagtgtcatgaag
aatgctgaagagaatctcattgaccttctaagccacccatcgcaaccgtacacctcagga
ggaggagggggtctaggtaccaaccctagtttcatgtctttatcctcctccataccatca
tctacccacctaccacccaccctcctggctatggggaccagactatacacccatctgcta
gagaaagaggcacctgggttcatgtacagaccgctctttgattcaagcggcaaggcaatg
attgagcaactgcttggttttatcgctcaagcccagactacagtcaagaccatggcagga
cctagcctaggagatatcactcagactatcaaatcattcttcaccagcagccttagacat
gctaatcatagcgccctctttgacgacattggtccggttgacacccgcaaagccgaggcg
tacctccagagctcaggagaattcctgtcagatatatttgatgtgcctttacctcatcct
gatgacaccatggcatggaacgtcggtcagatcggtcgtgatcaacacctaccacctgat
atgatggatggacagctcactccactgggaaggttccagcttattaacagacttagaagt
tctgatgtcaatttccaaggggaccctgaccttcaaccaatcaggagctacgagaatgct
gccctcgtgcggatgttgcatgcactctcttgtcagttcaatgatgcctttggtgacaag
cttctggagatctgttcccaaggtggcttgcttggagccatggcccgttggtacttcaac
cctaggggaaaccctcattgccatccaactgacccttccggaagagtgccatcgtggtat
cgtccaagactgagtctgcgattcctggccaattatcgaaccttgacatatcttgccatt
ctgtacctcctccttgtctatttctgtgacatcatgccaacaggctttgtggcattcctt
ctggcagcagccctctttgttggtttcctaggctcgttgtttacttatcttcgaggagat
gagagagaagaggtttatcttcagcattatcatcatcaacatggtgattga
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