Lytechinus variegatus (green sea urchin): 121408640
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Entry
121408640 CDS
T11173
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121408640
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
121408640
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
121408640
NCBI-ProteinID:
XP_041456105
LinkDB
All DBs
Position
2:64348845..64444470
Genome browser
AA seq
2254 aa
AA seq
DB search
MSGANSAANGASLEDCYTNLFAVADLSGIKWRQYSWTCPTEPKAPLEDPVLRSYANCIKE
NILSVWRCHNTLRADLMLDTETPEQNKELWIYWYGDDPKFESLIVDELQGGIQAQGVWDN
CMSYECRTLLFKSFHNSIERCLLSGGYVRLGRWFVKPFTNYPIPGENLSDHHSVSFSFFL
HGEKTVCSNVEVGLHQPVCRLTADHLAIAQGSATAVPVILSPYGLSGFLTGQAYKATHQV
AQRILFEWQCFYPIKLQKTPKGERDRHHHHHHHHHHQHHHTQHHPHHYHPGYREEEEDNT
IPAVVEVHVGSYLTDGYLTGGIRMLYPSCYVLVPQSEFSHHHAMAVQAGGYIPPPSMGLG
HGKINGPATPGLSSVALTPPTSPPDQQLPPGDGSGALYTGGSTLDPSLGDDGDDSCTGAL
IHKVTSKVWSQWLTETVLPTPGSGGAGGTLPNGSMASTPGTITNTSGGVGGGAGSMSSQQ
SSLEPCSISAEDNNSNLETKPSLVPPPQPSPTANQFTWQFQDPSSKTDCACSRQKVLKLK
SRSKSPSSTGSAHSGHSGIGNPAFSGNVHRQQRSQRPSTPFHHRATHTDDLIGVDQELSS
RLAPIGVPTTPSSSVGPVSQESKPSNNALPKPSPAAFRTPGSTDPVLTESPPSVAPSPLI
PPPTGTGLNPSERDRTMPTLSPYPPPRNGETGLPQANSGPVGSSIGRNCDMGHSIERDAL
IGRTIGHKETTIKQEEDKVWQNFRLPSEHHMDSKRPLLPLLSYEKREEENENMFDSLYDP
ANNDEIFCQPHKKLKEEKPVQPAASALDFPGEMDIGMRHNRPPSPVEDPYEFMEHDTSPT
QGGRISISARGRMKVNGRTRGGPRRPSIKKSKIKEEEIQRRAEEEKPRPETLAADGQSNV
FNTDPSKAMASAANKTMAIKGETKRLMHTDDIKVTGMGDLERLFESSSSDDDDGGFDDMV
SQVIHRGEESSTKPFGNSLHSSTGMPGTSQTGPDLARMYPTPPSLEQQNSAFSPVNLPCH
EYINHGSVQGITQIEHSAAGDFNEIEADENMGSPKPEQIQDWSFVYKIPPTERFVGPSMY
APLKALPSSKQPPLKIPEACHYRPSWQLPLSPKPDLLPVTKDSLTLEMEMNMNQPIVFNA
PGPTLMQSPAAYPGSQEPRSAANIDLQSPASEASSYVRNINSMEAPTPASNIPEAHSLLV
NLTLSDSLLNIYKDRNFDSSVMCVCNKNHMCQCGFSAVMNRRYAVGSGLFAEDESEITGQ
PADAALWTFHKDNPMLAGMPDRKPLLSVEDASSEKDGKEVSRTAKCVLRLIQEQCNSPYA
TLARLAGCVHKRGINSSGPLARSQIEITDGCDACFAALDLGRILMDGTAGSKIDDALLKS
SCLHSWPYTPALARSTMSSQDVVRTLSSLQPLLQDAIQKKRTTRLWEKPYTVQGPLTWQV
FFNIGARGPAETPEPLPIPRLMIGHDKDWLSSSPFALYYWEKLMLEPYSSARDVAYIALV
PENKYILRCATMFFKELTAVYEGCRLGRHAPIAKTFQDGIMKIGKKYAQKLSNEPVDVWF
SDVTHLPEADKLKLYAQFCRAYVAPFLNQEQPDASMFRTSRHHSSSSAGPNLPGSGSSGP
GYSSSSSYVVGSSSSSGSQGGSLLEQGSQGSDASSASMPAPSSTPSRPANRQDSKDSGVA
SSDNKENIPKGTALETVTPRESEQPPAVVVYIVDPFRRGEDAEEEGEVSVATLGLMHCFA
EIFDKLQVSLQRNIAFQIIPLHQVLQVANSEVSSRFLNQLKSVAFSVFAQCRRFQSPTIP
GRSLTGFGPAADLDRMIISKNVEHNEDRLYAPPFILAPIKDKQTELGESFGGLRQACGEL
FCSYCLSHDQRWLLVSCTDSKGELMETQIINVDVQNSKRRNKVSIRNIALYCLWDFLMGV
MSKASIPWRLVIGRLGRLGQGELKDWSMLLSRKNLANYSRKLREQCSMCSVPGTCDFPCI
LSACLVSTEPEPALRIMADMVAADKCSKNSQRDQPSCQLHTPDDASCTHIMVFPTSATKQ
AAATNMPQDQADLTFNSDIRLDDEDNIFDEEMLLNIFMNPSTMMPDDPTNIQLDLDQEVI
PDGPAPAAAGPGNPTTRQQPNTESGIPAEPEEVLRGILQQPLALGYFVSTAKTGPLPKWF
WSACPEAENSCPVFLKAALHVHNPSEQPTDDILQTKHSHPLDSDKTPEVLRYVLETYNSL
SWLTVDPASGDRRSCLPVHMVVLVQLYNTIASLQ
NT seq
6765 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagcaaattcagcggcgaatggggccagtttggaagattgttacaccaacttg
ttcgccgtggccgacttgtcggggataaaatggcgacagtatagttggacctgccccaca
gagccaaaagcgccgctggaggaccctgttctgcggtcttatgccaattgcatcaaggaa
aacattttaagtgtgtggcggtgtcacaacactttgagggccgatcttatgctcgacact
gagacaccggaacagaataaagaactgtggatatactggtatggagatgatcccaagttt
gagagccttatcgtagatgaattacaaggtggcatccaagcccagggtgtgtgggataac
tgcatgtcctatgagtgtaggacattactcttcaaatccttccacaattccatagaaaga
tgtctactaagtggtggttatgtccggttagggagatggttcgtaaaaccattcacaaac
tatcctatacctggagaaaacctgagtgaccaccattctgtaagtttctcattctttctt
catggggaaaagacggtatgcagcaatgtagaagttggcctgcatcaacctgtctgtcgg
cttaccgctgatcatctggccattgctcagggttcggcaactgcagtgccggtgatccta
tccccatatggcctaagtggtttcctcactggacaagcctacaaggccacccaccaggtt
gcccagaggatcctctttgaatggcagtgcttctaccctatcaagctgcagaagacacca
aaaggggagcgtgatcgacaccatcaccaccaccatcatcatcaccaccaacaccatcat
actcagcaccatcctcatcattaccatcctgggtacagagaggaggaggaggacaatacc
atccctgcagtggtggaggttcatgtcgggagttatctaacggatggctaccttacaggc
ggtatccggatgctgtatccgagctgctatgtgctggtacctcagagtgagttctcccat
caccatgcgatggctgttcaggctgggggctacatcccaccaccctccatggggctaggg
catggcaagatcaacggacctgcaactcctggcttgtcatcggttgcccttacccctcca
acctcccctccagaccagcagctcccacctggagacggctcgggagccctgtacacaggg
ggatctaccctggatcccagcctgggagatgatggagatgactcctgcaccggagccctt
atccacaaagtcacctccaaggtttggtcccagtggctaacggagaccgtccttcccaca
cctggtagtggcggtgctggtggtaccctgccaaatggatctatggcatcgaccccaggt
accatcactaataccagtggtggtgttggtggtggtgctggatcgatgagcagccagcag
tcatcactagaaccttgcagtattagtgcggaagacaacaactcaaatctggagaccaag
ccatccttggtgcccccgccccaaccctctcccacagccaaccagttcacttggcagttc
caagacccttcctccaagacggattgtgcttgctcaaggcaaaaggtgctgaagctgaaa
tcccgaagcaaatctccatcatctactggttctgcgcattctggccattctggtattggc
aatccagcgttctcgggcaacgtacaccggcagcagcgtagccaacgcccttctactccg
ttccaccaccgggcgactcacaccgatgatctcataggagtcgaccaggaattatcatcg
aggttagccccgatcggtgtgccgacaacgccgtcgtcatcggttggaccagtctcacag
gagagcaaaccatcaaacaatgcactgcctaagccaagccctgcagcgtttagaactcct
gggtcaacagaccctgtgctaaccgaatctccaccctctgtagcgccgtcaccgcttatc
ccacccccgaccggaaccggtctgaatcccagtgagagggacaggactatgccaactctg
agcccgtatccgcctcctcggaatggggagacgggtttgcctcaagccaacagcggccca
gtaggatcctcaatcggtaggaactgtgatatgggacactcaattgagcgtgatgcgttg
atagggagaactattgggcataaagaaacaactataaagcaggaggaagacaaagtgtgg
caaaatttcaggttacctagtgagcatcatatggactcaaagagacccctcctgccattg
ttgagctatgagaaacgagaggaggaaaatgaaaacatgtttgattcgctttatgaccca
gcaaataacgatgagatcttctgccagccacacaagaagctgaaggaagagaagccagtc
cagccagccgcttcggccttggacttccccggtgagatggacattggcatgcgccacaac
agaccgccctcacccgtagaggatccctatgaattcatggaacacgatacatcacctaca
cagggtggtagaatctccatctcagccagaggaagaatgaaggtcaacgggagaacgaga
ggtggtccgagacgtcccagcatcaagaaaagcaaaataaaggaggaggaaatccagaga
agggctgaggaagagaaaccaagacctgagaccttagcagccgacggacaatccaatgtc
ttcaacaccgatccatccaaggccatggcatctgcagcaaacaaaacgatggccatcaag
ggagagaccaagcgcttgatgcacacagatgacatcaaggtgaccggtatgggtgatctt
gagagactctttgaatcttcttcctccgatgatgatgacgggggttttgatgacatggta
tcccaggtgatacatcgaggggaagaatcttcaactaaaccctttggcaactcattacac
agctccaccggtatgccaggcaccagccaaacgggtccagatcttgcccggatgtatccg
accccgccctctttggaacagcagaactctgccttctctcctgtcaacttaccctgtcat
gaatacattaatcacggttcggtgcagggtatcacccagattgaacacagtgcggctgga
gacttcaacgagatagaggccgatgaaaacatggggagccctaagcctgaacagatccag
gattggagttttgtgtacaagattccacccacagagagatttgttggtcccagtatgtac
gctccgctgaaggccctaccgagcagcaagcaacctccactgaagatcccagaagcatgt
cactataggccatcctggcagttgccattgtcacccaagccggaccttttgcctgttacg
aaagacagtcttacgctggagatggagatgaatatgaaccagccaatcgtgttcaatgca
ccaggacctaccctcatgcaatctcctgcagcttacccaggtagccaggagcctcggagc
gctgccaacatcgacttgcagtctccggcctcggaggcctcctcttatgttaggaatatc
aactcaatggaagcgcccacacctgccagcaacatcccagaggcacacagcctcctggtc
aacctcacactgtcagactcgttactcaacatctacaaagataggaactttgatagcagt
gtcatgtgtgtgtgcaacaagaaccacatgtgccagtgtggcttcagcgccgtcatgaac
agaaggtacgctgtgggcagcgggctctttgccgaagatgaatctgaaataacgggacag
ccggccgatgcggccctctggacgttccacaaagacaatcccatgctggcgggcatgcca
gaccgcaagccgctcttgtcggtggaggacgcgtcgagtgagaaagatgggaaagaagtg
tcaaggacagcaaaatgtgttttgagattgattcaggaacagtgtaacagtccgtatgcc
acgctggcgaggcttgcagggtgtgttcacaagagaggtatcaacagttcaggtccgctg
gccaggagccagattgaaatcactgatggctgtgatgcttgttttgctgcgctggatctt
ggtcggattcttatggatggtactgctgggagtaagatagatgatgcgctcttaaaaagc
tcctgtctacatagctggccttacacaccagcactagcccgaagcacgatgtcatcacaa
gatgtggtgcggacgttgagttcactgcaacctctgctgcaggatgccatacagaagaag
agaacaacaaggttatgggagaaaccttacacagtacagggtccactcacatggcaggtc
ttctttaacattggtgccagaggtccagctgaaactccagaacccctccccatacctcgt
ctcatgattggtcatgacaaggattggctgtcatcttcaccattcgctctctactactgg
gagaagctgatgttagagccatactcctcagccagggatgttgcatacatagccctggta
cctgaaaacaagtacatcttacgttgtgccacaatgttcttcaaggaacttactgctgtc
tatgagggttgtcgtttgggtagacatgcccccattgccaagacgttccaggacggtatc
atgaagatcggcaagaagtacgctcagaagctcagcaatgaaccggtagacgtctggttc
tcggacgtaacccacctccccgaggcagacaaactcaaactctacgcacaattctgcagg
gcctatgttgctccattcctgaaccaggaacagcctgatgccagcatgttccgcacctct
cgtcaccattcctcctcctctgccggccccaacctccccgggtctggcagcagcggtccc
ggctactcctcatcctccagctacgtggtagggagttcaagctcgtcaggcagccaggga
gggtcgttgctggagcaaggaagccagggttccgatgccagtagcgccagcatgcctgca
cccagttcaacacctagcagaccagccaatcggcaagactccaaggacagtggcgtcgcc
tcctccgataacaaagagaacatccccaagggaaccgccctggagacggtgacccctcgt
gagagtgagcaacctccagcagtggtggtgtacattgtggatcccttcaggagaggagag
gatgcagaagaggaaggggaggtgtcggtcgccaccctcggcctcatgcactgctttgca
gagatctttgataagcttcaagtgtcccttcaaaggaacattgcattccaaatcattccg
ttacaccaggtgctgcaggttgccaacagcgaggtgtcgtctcggttcttgaaccagctc
aaatcggtggccttctctgtcttcgctcagtgcaggaggttccagagccccaccatccct
ggcaggagtcttactggcttcggacctgctgcagaccttgataggatgatcatcagtaaa
aacgttgagcacaatgaggatagactctacgctccaccgttcatcttagcccctatcaag
gacaagcagacggagctcggagagtcctttggtgggcttcgacaggcttgtggtgaactc
ttctgcagctactgtctctctcatgatcagagatggcttcttgtctcttgtacagactcc
aagggagaacttatggagacacagatcatcaacgtagatgtccaaaacagtaagaggcgg
aacaaggtgtccatccgtaacatcgccctctactgtttgtgggatttcttgatgggtgtg
atgtctaaggcttctatcccttggagactagtcatcggtagactgggccggcttggacag
ggtgaactaaaagactggagcatgttactaagtcgcaagaaccttgccaactacagccgg
aaactgagagagcagtgttccatgtgtagcgtgccagggacgtgtgactttccttgtatt
ctcagtgcatgccttgtctcgacggaaccagaacctgctcttcgcatcatggcagatatg
gtagcagcagacaagtgcagtaagaacagccagagagaccagcccagctgtcagctgcac
actccagacgacgccagctgtactcatatcatggtcttccctaccagtgctactaaacaa
gctgctgcgacgaacatgccccaagatcaggctgacttgacattcaattccgatatacga
cttgacgacgaagacaacatttttgacgaggaaatgctactcaatatcttcatgaatcca
tccaccatgatgccggatgatcctactaacatccagctagacctggaccaggaagttatt
cccgacggaccagcgccagctgctgccggtcctggaaacccaaccacaagacagcaaccc
aacacggagtcagggataccggctgagcctgaagaagtcctccgtggcatcttacaacaa
cccctagccctgggatactttgtctccactgccaagaccggtcccctgccaaaatggttc
tggtctgcctgcccagaggctgaaaacagctgtcctgtcttcctcaaggctgccctacac
gtccacaacccttcagagcaaccgactgatgacatcttacaaaccaaacactcacatccc
cttgactcggacaagacgccagaagttctcaggtatgtgctagagacttataatagtcta
tcctggctaacggtggaccctgcaagtggcgatagacggtcttgcctgccagtccacatg
gtggttctagtacaactctacaacaccatcgcttctcttcaatga
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integrated database retrieval system
