Lytechinus variegatus (green sea urchin): 121408788
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Entry
121408788 CDS
T11173
Name
(RefSeq) E3 ubiquitin-protein ligase ZNRF3-like isoform X1
KO
K16273
E3 ubiquitin-protein ligase ZNRF3 [EC:
2.3.2.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121408788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121408788
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121408788
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121408788
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
ZrgA
DUF4381
Tcell_CD4_C
Motif
Other DBs
NCBI-GeneID:
121408788
NCBI-ProteinID:
XP_041456355
LinkDB
All DBs
Position
2:complement(68649583..68705468)
Genome browser
AA seq
673 aa
AA seq
DB search
MEIVNKVEEAWARIQPPPQLTPDPRYKSSNEFFDMGIFVAFFILISIICLLLVLKLRWRQ
KRKQSSQARQALNALSKMEVRKYCSNNEQRYSQKILPDDRWATTLSIASDGTICAICLEE
FREGEELRIVPCAHEFHKHCVDPWLLSNRTCPLCMYNILDCGLDGKSSEASPSGHVSPVD
QQLRVSLPNSPTRDASWEGVYAAAPSHHHHRTSSSHHHHHHHHKHSRSKCPQSSSKREHR
STAVSGSNVREGVPRLPSTSQSQLERWFGRGPLTWQSNCEYVCSHCHRHINCNGQYNSQC
VTPRQLGLASFESHYVVNSSYVPWNNSGGGGGVNCSRGASGRKGVSQGSRHYRDQCHVPV
QVHLETVTSTACQQGAINQRRASESESSLSLSAFNADFECSDSTSSPENFDSTQSVYGSS
TTCHSEVTGCDPCVYSKPGVVQQYWNLGPPAQLTPSCVHKTKTQSSNRNQNNTSDSDDPK
RSGSDANASASSGSNFSTRVNTSRRDGIQPYKPQSSISTVTTPDSVSSQVRTNHVCSPSS
KTPTPSESKTDTPNTITPQTHYPQPLPKSTDSSRQQTPCACCGDNEVWDQRRPASPEDKA
PSGDKPERGVKGLRRSSRGTPTRKPRGHLTLPVQSVATLKNTQGTVITMPVQGTSPPPTG
AANTSRKVMEEIV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagtcaacaaagtggaggaggcttgggctaggatacaaccgcctccccaactc
accccagacccaagatacaagagttccaatgagttctttgacatgggtatctttgtggca
ttcttcatcctcatctccatcatatgcctgctccttgttctcaagttaagatggaggcag
aagagaaaacagtcctctcaggccagacaagcattgaatgcactatccaaaatggaggtt
agaaaatactgttctaataatgagcagcgttattcacagaagatccttccagatgacaga
tgggctaccacactcagtatagcatcggatggtactatctgtgccatatgtttagaagag
ttccgggaaggagaggagctaaggatagtaccatgtgcacatgagttccacaagcattgt
gttgatccatggctactctcaaaccgaacttgtccgctgtgtatgtataatatattagat
tgtgggttagatggaaaaagttctgaggcttccccatcaggtcatgtcagtcctgttgat
caacaacttcgagtcagcttgccaaattcaccaacaagagacgcatcgtgggaaggggtt
tatgctgcagccccaagccatcatcaccatcgaacatcatcatcacaccatcaccaccat
caccatcataaacattcccgaagcaaatgtccgcagtcatcgtccaagcgagaacatcgg
tcaacagcagtgagtggttcaaatgtaagggaaggtgtgccgcgcctcccgtccacctct
cagagccagcttgagagatggtttggaaggggcccgttaacgtggcagtcaaactgtgaa
tacgtgtgctcacattgtcatagacatatcaattgcaacggtcagtacaactcccagtgc
gtcaccccacgccagctgggattagcttcgtttgaaagccactatgtggtaaattcatca
tacgtcccttggaataatagcggcggtggtggtggagtgaattgctcacgtggtgctagt
ggtaggaagggtgtgtctcagggatccagacattaccgggatcagtgccatgtacccgtc
caggtccacctagagacagtcacctcaacggcttgccagcagggtgccatcaaccagcgc
agggcttccgaatcggaaagcagcctcagcctatcggcgttcaatgcagactttgagtgc
agcgattccacaagcagccctgaaaactttgacagcacgcagagtgtttatggtagctct
acgacctgccacagtgaggtaacgggatgtgacccgtgtgtgtattcaaaaccaggtgtc
gttcaacagtattggaatttaggcccaccagcacagctcacaccttcatgtgtacataaa
acaaagacgcaatcatcaaatcgtaatcagaataacacttcagacagtgatgacccaaag
cggtcggggagcgacgccaatgctagtgccagcagcggcagtaatttctcaacgcgagtc
aatacatccaggagagacggcatccagccgtacaaacctcagagcagtatatcaaccgtt
acaacaccagactctgtgtcatcccaagttagaactaatcatgtgtgctctccatcctct
aaaacccccaccccctcagaatccaaaacagacacgcccaacaccatcacccctcagacg
cattatccacaacccttgcctaaatcaacagactctagtcggcagcagactccttgtgca
tgctgcggagataacgaggtatgggaccagcggcgccctgcatcaccggaagataaggct
ccctctggtgacaaacctgagagaggggtcaagggccttcggaggtcaagtagagggaca
cctaccagaaaaccaagaggtcatttgactcttccagtgcaatctgtagctactctcaag
aacacccagggaacagtcattaccatgcctgtacaaggaacgtcacctcctcctactggt
gctgcaaacacctcacgcaaggtcatggaagaaatagtatga
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