Lytechinus variegatus (green sea urchin): 121408796
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Entry
121408796 CDS
T11173
Name
(RefSeq) lissencephaly-1 homolog isoform X1
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00565
Ether lipid metabolism
lvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
121408796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lvg03036
]
121408796
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121408796
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121408796
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121408796
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_Nup120_160
NBCH_WD40
WD40_RFWD3
LisH_PAC1
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_SPT8
LisH
Beta-prop_RIG_1st
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Nucleoporin_N
Beta-prop_WDR11_2nd
Pox_A_type_inc
PROPPIN
LisH_2
SutA-RBD
Motif
Other DBs
NCBI-GeneID:
121408796
NCBI-ProteinID:
XP_041456370
LinkDB
All DBs
Position
2:68925150..68960446
Genome browser
AA seq
415 aa
AA seq
DB search
MVLSQRQREELNKAIADYLRSNGYEKALMEFQKEADMSDELERKYNGLLEKKWTSVIRLQ
KKVMDLEMKLNEAEREFSSGGPNREKRSPTEWIPRPPEKYALTGHRSPITRVIFHPVYNV
MVSSSEDATIKVWDYESGDFERTLKGHTDSVQDICFDHAGKMLASCSADMTIKLWDFSTF
ECMKTLRGHDHNVSSVSFLATGDHLVSSSRDKTIKQWEVSTGYCVKTFTGHREWVRMVRP
SPDGSLLASASNDQTLRVWVVATKECKLELREHDHVVECVAWAPESAYPTLNELKGVELN
NYDGLEKKGVRSTPFLVSGSRDKAIKIWDVSAGGCIMTLTGHDNWVRGAVFHPGGKFIIS
VADDKTLRVWDYKNKRCAKTLPAHDHFTTTLDFHRSAPYVITGSVDLTIKVWECR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggtgctctcacaaagacagagagaagagctaaacaaagctattgcagactatctccgt
tcaaatggctatgaaaaagcccttatggaattccagaaagaggctgatatgtctgacgaa
ttggaacgaaaatacaatggtctcttggagaagaaatggacttcggttatcagattacaa
aagaaagttatggacttagaaatgaagcttaatgaggcagaaagagaatttagttcaggc
ggtccaaacagggagaagcggtcaccaacagaatggatacctagacccccagagaagtac
gcactaaccggtcatcgtagccctattactagagtcatctttcatcccgtctataacgtc
atggtgtcatcgtcagaagacgccactatcaaagtctgggattatgagtcaggagatttt
gaacgtacactaaaaggtcacacagactcagttcaagatatatgtttcgatcacgcaggc
aagatgctagcttcctgctcggctgatatgacgatcaagttgtgggatttctccaccttt
gaatgtatgaagaccctccgtggccatgaccataacgtctcctcggttagtttccttgca
acaggagatcacctagtctcatcctctagggataaaaccatcaaacagtgggaggtatcc
actggatactgtgtgaagacattcactggacatagagagtgggttcgtatggttaggcca
agtccagatggatctctactggcttctgcttctaatgatcagaccctacgtgtttgggtg
gtagctaccaaggaatgtaaactagaactgagggagcatgaccatgtggtggagtgtgta
gcttgggctccggaatcggcataccccaccctgaatgaacttaaaggagtagagctgaac
aactatgatggtcttgagaagaaaggagttcgctctacgccattccttgtgtctggctca
cgtgacaaggctattaagatctgggatgtcagcgctggaggttgcatcatgactttgact
ggacacgataactgggtgagaggagccgtgtttcatcccggtggcaagttcatcatcagt
gtggctgatgacaaaacattacgtgtgtgggactacaagaacaaacgctgtgcaaagaca
ttgccagcccatgaccatttcaccactacgctagatttccatcggtccgccccatacgtg
ataacaggcagcgtggatctaaccatcaaggtctgggaatgccgttga
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