Lytechinus variegatus (green sea urchin): 121408943
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Entry
121408943 CDS
T11173
Name
(RefSeq) ribosome maturation protein SBDS-like
KO
K14574
ribosome maturation protein SDO1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121408943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvg03009
]
121408943
Ribosome biogenesis [BR:
lvg03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121408943
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
Dehydratase_SU
KH_DEAH11_2nd
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
121408943
NCBI-ProteinID:
XP_041456608
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All DBs
Position
2:complement(72798438..72803704)
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AA seq
254 aa
AA seq
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MSGTIFTPTNQIRLTNVAIVRIKKTGKRFEIACYKNKVMSWRNKVEKDIDEVLQTHSVFV
NVSKGQVAKREDLVKAFGTEDTTEICKQILTKGELQVSDKERSQQLESMFRDIATIVAEK
CVNPNTKRPYTVGMIERAMKDIHYSVKPNRSTKQQALEVIRKLRETETMAIDRAQMRLRI
VLPGKEAKKVKSKLIQLIATVEEEHFSDGLEMVCLADPGCYREMEELVKESTRGKGMVEV
VSLKEVEEGDERLE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaacaattttcactccaacaaatcagatccggttaacgaatgttgccatcgta
agaataaagaaaactggtaaaagatttgagatagcctgctacaagaacaaggtcatgtca
tggagaaataaagtagagaaggacattgatgaggttttacaaacgcattcagtatttgtg
aatgtctccaagggtcaggtcgccaagagagaagatcttgtcaaagcttttggaacagaa
gataccacagagatttgcaaacaaattttaaccaagggtgaactgcaggtctctgacaaa
gagcgtagccagcagcttgagtccatgttccgtgatattgcaacaatcgtagctgagaag
tgtgttaaccccaacactaagagaccgtatactgtaggcatgatagaaagagcaatgaaa
gatatacactattcagttaaaccaaacagaagtacaaagcaacaggctctggaggtcatc
aggaaactacgtgagactgagaccatggcaatagaccgtgctcagatgaggttgaggatt
gttcttccggggaaagaagccaagaaggtgaagagcaaattgatccaactcatagctaca
gttgaagaggaacatttcagtgatggtttagaaatggtatgcctagctgatcctggatgc
tacagagagatggaggaactggtcaaggagagtaccagagggaaggggatggtggaggta
gtcagtctcaaggaggtggaagaaggagatgagagattagaatga
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