Lytechinus variegatus (green sea urchin): 121409056
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Entry
121409056 CDS
T11173
Name
(RefSeq) teneurin-3-like isoform X1
KO
K24473
teneurin
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lvg04990
]
121409056
Domain-containing proteins not elsewhere classified [BR:
lvg04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
121409056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
EGF_TEN
EGF_Teneurin
TTR_TEN1-4
GBD_Tenm3
FN-plug_TEN1-4
Tox-GHH
RHS_repeat
Teneurin_ABD
EGF_2
NHL
EGF_Tenascin
Vgb_lyase
CarboxypepD_reg
Dehydrin
Motif
Other DBs
NCBI-GeneID:
121409056
NCBI-ProteinID:
XP_041456788
LinkDB
All DBs
Position
1:complement(21396376..21450537)
Genome browser
AA seq
2885 aa
AA seq
DB search
MAARGSVLAYSVQPVPKEYYHQQPLQQVQQQHQPLQHQLPHQQQQQHPPPPPPEGNRKSL
HHRQRRQRQPHHQQQQRHQQARSSCSSSSQEDDQSQQGYGVRNGGYSSNETLRMSEVPVS
PTSEDGKELFPQPEVRAKEESLCHPAVRMEPPIAEHIAEERPYYDGKERPSDLKCPSDNF
DSTLGSMEGSINASTSTRGDVNHDQLLQEVDHYLHKQSLDAHSTGSQSTRSSLTMTENEM
DHDIPLHHHPDQQGAIRLDHMTSMPGYPPIGLSTYPHLHNGAFQGTPANQIRGASLPTNG
VPYPPHGIVYHQLQPTNEDEEETTFMGSLPQSYSTGTGIYSSIKENQYNSIGDPNSLRHS
NTASQTLPGSSGMYLQPRTGNIIHAVPLMTTCDLQTLHTTSTLATNSGTLNELNNARHRQ
ERLFEYPLGMSSGVPLAAYPAMSNGKRTNETSEMKYPTMQEKYGCKDHMSWRCLAVILVL
LTIALLALVTYFAVTLSRPLPSMPNTVNIDDTRPTSPGNEERTTRKPKRPLPPSNEIELT
TTMTTTSPPIHSPAIPYTFGTAAQKEIPPGHFWTLFSPVDSSTFIQFNLTLSKRNGFVVY
AQRARAPSHSFYDFMQVHVGTGRRGKRSADTLDEDLPELTYHDVLRLGGLKYDESKVGSR
VKRSNSHLMHTWSFMEELNAGEWYIAVFNDGPYAEEVNLVTGRKNGWSCPGDCSGHGDCL
RGQCICQEQYTGNDCSQGVCPVLCSGRGQYVHGFCECVGGWKGPECSIPWDQCLVADCSH
HGVCLEGECVCSRGFTGEACEQEVLVDDTLHCSNDTDCFPNAQCISGMCHCLEGWTGSTC
EEEECILPCSPHGECVDNSCNCEQGWNGKLCGLEGCPFGCSGHGSCELINATWSCVCEEL
YHGPGCSIGTETDCTDEVDNDGDSLIDCEDPDCCLSASICIGDALCEAPPDPVEVIRSSN
QLSALTPSILFYDRVKFLIEPNSIHRSPPQILFSNDSVVSVIRGKVLSHEGSPVVGVRVQ
VDNRPFMGFTYTREDGMFDMMVIGGGSISLSFARHPFITAHIPTYIPYNDIILMDNIHLE
LLPGRRSVSYSVPETVHCEGSAYIKPEFSILPQAVMDNCGSQGILGAVLDQRAMHEQIEI
PGTRATLDYYSQRSVVNSLPSTFNARLTGHFIPRNLKLVHAVVTLAGRRFHTVLEPEPFL
NYTFSWDKLNAYGQLVYGDQEALVGIGYEYHTCTEIIWSHQSTRLPGYDWSTTSLAGWNL
PMHHTYNPQKAILQLGDGCQVKYSQHPPIIQTIVGNGRPRNADCNQCEGRAKGARILAPM
AVASSPDGSYYVGDGDFIRRVGPEGNITNVLHLGYMPTYKYYIAISPLDGKVYISDSQMR
QVLRLRDNKDVADINNNVVVVAGTGQACPPIDGSECGNNGDATQARLIAPKGIAVGKDGT
VYFVDGTVIRKITTDGTIHAFLGTPGIQGPLRLPQCRGTMSFNQVKLQFPTELAVNPLDD
SVYVADDDIIIRLGQDKRASVLAGVPYNCPLAYSIDLGESDGSAPDDNISTYEYLRPRPA
NEVALIMPSSMAFSRKGDLYVAEANHRAINRISKISSDGFISRYAGQETTCDCLLEDCDC
FGGDKFYAMDARLHGPIALTVMPNDDLIVADQGNLRLRKIAPRTPKHRVGRYHAYQIVSP
DREEIYFFDMYGIHTHTKSLISDQVVYNISHSGNILDSVADSAGVVIGVHRRLDGQPSNI
VISGIGSLLQISVDSLGRLSTAQDTLRNVIHQFGYHGETDLLTLRWEGQSLKRMYEYEEN
GQLSSVRHLNGQMVTLQSAVNSSVSSVIINQPWQTSLASDITHLNGFISSNFSQADLVDS
VIIDHDKSTSITFPNGLVVGTESQPHPLLESDVEGSLSKRKIKLPETSPHRLDWNFYVRK
GGRNRDRVLVVGRKLRINGENILSMEYNRVLRKDTVLDPDNTQLLEISYNSAKLPMEWKP
AYGFILTNASYDSQGRLTRWQRDLISESYGYDNLGRLKRIHSGTNGTWRFSYNTGMLPSE
ITLPNREHYEVTYDGSGNIAMVTMPTGRHHYINSVPSVGYHRIIYSDGTRPWLILDQTEE
GLPLRRYSPGTSRRMAYVYDNKGRISEIYYDQTSVKYKYNREESQVKLLELQVGDFQNAE
RLRYDGPMVKQKIIRTSGFGGFMNGRFEYIYDRNMRLLNVFAEFNTTVLPEHNRAYDPVY
GRLTQLGAFTLSYPDNTVQNYTDQNFEMSKKFGAYILLQEVHYKVKGQTVRRLELLFDTS
SRIIWNRLHIDDTSHTTDYVYDPNGQLIEVKTDSQIAWQYTYDSNGNLASFTHRQNTTHL
YYDDFDRITRIGQIEYLHDQDGFLLQRGGERFTYDSRGQLVHAFQLNVYEVRYKYDGVGR
RIWRKDHTGRQIQFFYADIEHPHRITHVFDQSRQEILSYEYDLQGNLFAVMQNQRQLYVF
VDQVGSPIAVYDENRTPRKIVEYDPRGNVLHDSSPAFMLHVGFRGGLYDAHTKLVQFNGR
DYDSLSGQWTSADETFYENIARPQKTMLFNLYTFHGNNPVNPKLHPNYLMSLEDWLPVLG
YDMTSLVPEVDRYGYPLPSASLGSYQDLKPSATKDFVNWAKVRWGYEQQVMTASYSPNSN
FHAISNRHTISGISPNSEEGMSPISESSVKYATLPTLIDKGVILAISGERVICKKALDAE
SDALNIASVVNNSLILDRWHYSDGQREIRYFVKSDLTRYVSDLRNLGYNANITDTSDVVD
LHVGTVHMSAQMYDAPYEFVVISLSNNYTTWKIFYGITMRQAAEVVLESAREVAMHQAWL
NERRILASGRRGTYFWTNVERISLLQNNMVPGYEGLYTLDPMVYPEIAFDGNNIKIIRST
SETAR
NT seq
8658 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgtggctctgtactagcttactcagttcaacctgtacccaaggagtattat
caccagcaaccattgcaacaggtgcagcaacagcatcagccactgcaacatcagctaccg
catcaacagcagcagcaacaccctccacctcctcctccagagggcaatcggaagagcttg
catcacagacagcgtcgccagcggcaaccgcatcatcagcagcaacagcgtcatcagcag
gcccgttcgtcatgtagcagttcctcacaggaggacgatcaatctcaacagggctacggt
gtaaggaacggaggctatagctccaacgagacactgcggatgagtgaagtccccgtctca
ccgacaagtgaggacgggaaggaattatttccacaaccagaggtacgagctaaagaagag
agtttgtgccaccctgctgtgagaatggaacctcccatcgctgaacacatagcagaagag
aggccttattatgatggtaaagaaagaccatcagatctaaaatgtccatcagataacttt
gattcaacccttggaagtatggaaggttccatcaatgctagcacgtcaacgaggggtgac
gtgaaccatgatcaactattacaagaagttgatcattatttacataaacaaagtttagat
gcccattcaactggtagtcagagtacaaggtctagtcttacaatgacagagaatgagatg
gaccatgatataccattacatcatcatccagatcaacaaggtgcaataagactggatcat
atgaccagcatgcctggctaccctcccattggcctctcaacctacccccacctacacaat
ggagcattccagggcacaccagccaatcagattcgaggagccagtcttccaaccaatggg
gtgccttatcctccccatggtattgtttatcatcagctacaaccaaccaatgaggatgaa
gaagaaacaaccttcatgggatcattaccacaatcatatagtactggtactggcatttat
agctcaataaaagaaaatcagtacaactcaataggagatccaaactctcttcggcattca
aacaccgcctcccagacgttacccggatccagtgggatgtacctacagccaaggaccggt
aacattatccacgctgtacccctgatgactacatgtgatcttcagacgttgcataccacc
agtaccctagcaactaatagtggtacactaaatgaactcaacaatgctaggcatagacaa
gaaaggttatttgaatacccattgggcatgagttcaggagtccctctggcagcataccca
gcaatgagcaatggtaaacgaaccaatgaaacctcagagatgaaatatcccacaatgcaa
gagaaatacggctgtaaggatcacatgtcgtggcgctgcttagctgttattcttgtttta
cttaccatagcccttcttgctcttgttacatattttgcagtgaccttgagtcgaccttta
cccagcatgcctaacacagtcaatattgatgataccaggccaacatctcctggtaacgag
gagagaacgacaagaaaaccaaagaggcctcttccaccatcaaatgaaatagaattaaca
acaacaatgacaacgacgtcaccaccaatccatagtcctgccataccatacacattcggc
acagcagcacagaaagaaataccaccgggtcacttctggactctattcagccccgttgat
tcctcaacattcattcaattcaacttgacactctcaaaacggaacggctttgtcgtgtat
gcccaacgggccagggcgccctcacacagcttctatgatttcatgcaggtgcatgttggg
acaggtagacgagggaagcgaagtgccgacacactggatgaagacttgcctgaactgact
tatcatgatgtactgcggcttggtgggttgaagtatgatgagagcaaggtcgggtcaagg
gtcaagaggtcaaatagtcacctgatgcatacatggtcattcatggaggagttaaatgct
ggtgaatggtacattgctgtatttaacgatggaccctacgcagaggaagtcaaccttgtg
actgggagaaaaaatggatggagttgtcctggggattgcagcggtcatggagattgcctg
agagggcagtgtatatgtcaggagcagtatacaggaaacgattgctctcaaggtgtatgt
ccagtgttatgttcaggtcgtggtcagtacgtccatggtttctgtgagtgtgtgggcggg
tggaagggacctgaatgtagcatcccctgggatcaatgcctggtagctgattgtagtcat
cacggtgtctgtctggaaggagagtgtgtctgtagcagaggattcactggagaggcttgt
gaacaggaggtactagtagatgacaccctccactgcagtaatgacacagactgcttcccc
aatgctcaatgtatctctggaatgtgccattgtttagaggggtggacaggttcaacgtgt
gaagaggaggagtgcatattaccctgctcgcctcatggagagtgtgtagacaattcatgt
aactgtgaacaaggctggaatggaaagctttgtggacttgagggatgtccatttggatgt
agtggtcatggttcatgtgaactgatcaatgctacctggagctgtgtatgtgaggagctc
tatcatggaccgggatgcagtattggaacggaaacagactgcacggatgaggtggataat
gatggagattccttgattgattgtgaggatccagattgctgtctcagtgcatctatctgt
atcggtgatgccctctgtgaagcaccccctgaccccgtagaggtcatccgttcatccaat
cagctttcagcattgactccatccatcctcttctatgatagagtcaagtttctcattgaa
ccaaacagcatccatcgtagtcctcctcagatactcttcagtaatgatagtgtggtgtct
gtcatcagaggtaaagtcttgtcacacgagggctcaccggtggttggggtcagagttcaa
gtcgataatcgaccttttatgggattcacctacaccagagaggatggaatgtttgatatg
atggtaataggaggcggctctatctcactctccttcgcccgtcatcccttcatcaccgct
cacatcccaacctacatcccttacaatgacatcatcctgatggataacatccatttagaa
ctcctaccgggtcgtcgtagcgtgtcttactccgtccctgagacggtccattgtgagggt
agcgcttatatcaagcctgagttctctatcctaccccaagctgtgatggataactgtgga
tctcagggtatactgggtgctgtcctggaccagagggccatgcacgagcagattgaaatc
ccaggcaccagagcaacccttgactattacagccaacggtcagtggtcaacagccttcca
tctaccttcaatgctagactgaccggtcacttcatccctcgtaacctcaagcttgtccat
gctgtggtcactctggctggtcgaaggttccatacggtcttagagccggaaccgttcctc
aactatactttcagttgggataaactcaatgcttatggtcagctggtctatggagatcaa
gaagcactcgttgggattggttatgaataccatacttgtacagagatcatttggtctcat
caatctaccagactacctggatacgactggagcactacgtctcttgctgggtggaatctt
cccatgcatcatacatataatccacaaaaagccatcctccaacttggagacggttgtcag
gtgaagtactcccagcatcctccaatcatccagaccatcgttggtaatgggcgccctcgt
aatgctgactgtaaccagtgtgagggtagggctaagggtgctcgtatacttgccccaatg
gctgtggctagtagcccagatggcagctactatgtgggcgatggtgacttcattaggagg
gtcggaccagaagggaatatcacaaatgtcttgcatcttggatatatgccaacctacaag
tactacattgccataagtcccctagatggtaaggtgtatatctcagactctcagatgaga
caagtcctgaggctcagagacaacaaagatgttgctgatatcaacaacaatgttgtggtg
gttgcagggacgggtcaagcgtgtccacccatcgatggtagcgagtgtggcaacaatggt
gatgcaacacaagcaaggttgattgctcccaaaggcatagcagttggtaaagatggcacg
gtgtactttgttgatggcaccgttatccgtaagatcaccactgacggtaccatccacgcc
ttccttggtacacccggtatccagggtccccttagactaccacagtgtagaggtaccatg
tcattcaatcaggttaaacttcagttcccaactgagctggccgtcaaccctctagatgat
tccgtctatgttgctgatgatgacatcatcatccgcctaggtcaggacaagagagcgtct
gtccttgcaggagttccttacaactgtcccttggcatactccatagatcttggtgagtca
gacggcagcgctccagatgataacatcagcacctatgaatacctgagacccagacctgcc
aatgaggtagctctcatcatgccaagctctatggctttctccaggaagggtgatctctac
gttgcggaagccaaccatcgggcaatcaaccgcatcagtaagatatcaagcgatggtttc
atctcaaggtatgcgggacaggagaccacctgtgattgtttgttggaggattgtgattgc
tttggtggtgataagttctatgcaatggatgccaggttacacggtcccatcgccctcaca
gtcatgcccaatgatgacctcatcgttgctgatcaaggcaatttgcgtttgcggaagatc
gcaccgaggactccaaagcatcgtgttggtcgctaccacgcctatcagattgtttcaccg
gatcgtgaagagatctatttctttgacatgtatggaattcacacacacaccaagagcttg
atatcggatcaggtggtgtataatatcagccattcaggcaacattctagactctgtggct
gattctgcaggcgtagtcatcggggttcatcgaaggctggatggccaaccttcgaacatc
gtcatctctgggataggatctctcctgcagatatctgttgattctctgggaagattgagc
actgcccaagataccctaaggaatgtcatacatcagtttggttaccatggagaaacagat
ctgttgacattgagatgggaggggcaaagtttgaagaggatgtatgagtatgaagagaat
ggtcaactgtcttcggtcagacatctcaatggtcagatggttactttacaatcagcggtc
aattcatctgtatcatcggtcattataaaccaaccttggcagaccagcttagcctctgat
atcactcacctcaatgggttcatctctagtaatttctcccaagccgacctcgttgattca
gtgataatcgatcatgacaaatctacatcgatcacattccctaatggactggtcgtcgga
acagagtcacaacctcatcccctgctggagagtgacgtagagggctccctatctaaacgc
aagatcaagctccctgaaacgagcccccatcggttggattggaacttctatgtgaggaaa
ggaggccgtaatagggacagggtactagttgttggacgtaaactcaggatcaatggtgag
aatattctatcgatggagtacaaccgtgttctacgcaaggataccgtcttggaccctgat
aacacacagctccttgagatatcatataacagcgctaagctaccgatggaatggaaacca
gcgtatggattcattctcaccaatgcttcttatgattctcaggggagattaacaagatgg
caacgtgatcttatctcagagtcatatggttatgataatcttggtcgtctcaagaggatt
cattctgggactaatggtacatggcgtttctcatacaatacaggcatgttgccctctgag
ataacgctaccaaacagagagcattatgaagtaacatacgatggatctggtaacatagca
atggttaccatgccaacaggaaggcatcactacatcaattcagttccatcggttggttat
catagaatcatttactctgatggaactagaccttggttgatactggaccagactgaggaa
ggcttgcctctccgtcgctatagtccagggaccagcaggagaatggcatacgtctacgac
aacaagggtcgaatatcggaaatctactacgaccagactagtgtcaagtataagtacaat
agagaggagtcacaggtcaagctgttggagctacaggttggtgacttccagaatgcagaa
aggcttcgttacgatggccccatggtcaaacagaagataatccgtaccagtggctttggg
ggtttcatgaacggaaggtttgagtacatctatgatcgtaacatgcgcctcttgaatgta
ttcgcagagttcaacacaacggttcttccagagcacaaccgagcttacgatcccgtctac
ggtcgcctgacgcagcttggggcattcacactctcctatccagacaacactgttcagaac
tatacagatcagaattttgagatgagtaagaagtttggagcttatattcttcttcaggaa
gttcattacaaggtgaaaggtcagactgtgagaagacttgagctgttgtttgacacttcc
agtcgtatcatctggaacaggcttcacattgatgatacgtcacatactaccgattacgtt
tatgaccctaacggacagctcattgaggtgaagaccgattctcagatcgcttggcagtat
acctatgacagcaatggcaaccttgcctcatttacccacagacagaatacaacacatctc
tactatgatgactttgaccgtatcacacgcattggtcagatagagtatctccatgatcaa
gatggcttcctcctgcagcgtggtggcgaacgctttacctatgactcaagaggtcaactt
gtccatgccttccagctgaatgtatacgaggtccggtacaaatacgatggagtgggaagg
agaatctggcgaaaggatcacactggacgacagatccagttcttctacgcagacattgaa
catccccaccggatcacgcatgtctttgaccaaagtcggcaggagattctgtcatatgag
tatgacctacaaggcaacctgtttgcagtgatgcagaatcagcgacagctctatgttttc
gttgatcaggtcggatcacccatcgccgtctacgatgagaacaggacccctcgtaagatc
gtggagtacgatcctcgaggaaacgtcctccatgattcttcacctgctttcatgctccat
gttggtttccgtggtggtctttacgatgctcataccaagcttgttcagttcaatgggcgt
gactatgactcactgagtggacagtggacgtctgctgatgaaaccttctatgagaacatt
gccagacctcagaagaccatgctcttcaacctgtacaccttccatggaaacaatcctgtc
aacccaaagcttcatcctaattatctcatgagtcttgaggattggcttcctgtgttagga
tatgacatgactagtcttgttccagaggttgatcgttatggttaccctcttccctctgct
agtctaggatcataccaagatctcaaaccgtcagccactaaggatttcgtcaactgggct
aaggtgagatggggatatgagcaacaggtaatgactgccagttactctccaaactcaaac
ttccatgccatctctaatagacacaccatatcagggatttcccctaatagtgaggaaggg
atgtcccctatcagtgagtcatcagtcaaatatgccactctaccaaccctgatagataaa
ggtgtaatcctggccatctctggagagagggtcatctgtaagaaggctcttgatgcggaa
agcgatgctctgaacattgctagtgtggtcaataattctttgattctggatagatggcat
tactccgacggacaacgagagatcagatactttgtcaagtctgatcttacgaggtatgtc
agtgatttgaggaaccttggttacaacgctaatataacagacacttcagacgttgtagac
cttcacgtaggtaccgtgcacatgtctgcgcagatgtatgatgcgccatacgagtttgtg
gtgatatctttgtcgaacaattacaccacgtggaagatcttttatggaatcacgatgcgt
caagcagccgaggtggtgttagagtcggcgcgagaggtagccatgcaccaggcctggctc
aacgaaaggagaatcttggctagcggtcggagaggaacttatttctggacaaatgtagag
aggatatcacttctacagaacaatatggttccaggttatgaaggcctttacaccttagat
ccaatggtctatccagagatcgcatttgatggaaataatatcaaaattattcgatcgact
tcggaaacagcaaggtga
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integrated database retrieval system
