Lytechinus variegatus (green sea urchin): 121409101
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Entry
121409101 CDS
T11173
Name
(RefSeq) centromere/kinetochore protein zw10 homolog
KO
K11578
protein transport protein DSL1/ZW10
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121409101
03036 Chromosome and associated proteins [BR:
lvg03036
]
121409101
Membrane trafficking [BR:
lvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
121409101
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
121409101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zw10_middle
ZW10_C2
ZW10_C
Zw10_N
EXOC6_Sec15_N
VPS51_Exo84_N
TMF_TATA_bd
CCDC90-like
COG5_N
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
121409101
NCBI-ProteinID:
XP_041456853
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Position
2:complement(76906434..76939476)
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AA seq
742 aa
AA seq
DB search
MASLVTEVLMNTGLMEKEDLATRIDKVSTQICELKAEISVALRQRYVDFIPSQDKIEKMH
SRVRSLDTEMHDLGDKIQGDIRVKLKTSTSDVVELSKQLDQSNATIAVLTTLCKAHQDLK
EFNTGILYEEYVQAANILDSLDCQLNLLCRSGYHEMKIVHALKSEETVVRETLFFHLGES
WSKTVLFQPVEGGKGKGAKSVISPQLVVVQNEKFQCTLQAMETTGCLNNKLESFSKKLLE
HILHPIIRRTDIHLNIESNQQKVTISIVKAKTEQSSSIPSPTSVFDDIIKVFEALGTPLL
SHVVKKRGHGQDTSIMSILGSLIWSSMSKVLIKDCLTPSIPATSTELHEYKLIFDATRKF
EESLQGLGFIAPDSHPLTDYGKNVNIHFANKRCQALLVEARRLMQQDLHNTVQVGGNEIR
TDEEGSGEEKNPLGPGLSAFPQCLISESVQKLLDMCQQTLCEASNSQEQCFQLFFTVRNM
LQLFCEVVPHYHKTSLYQLPRASALHHNNCMYISHHLLTLGHRYQHTFPTPLSDGASLFV
DLVPVFRKEAVTPFLAQMRSQRDLLLESVRIAEGFQRVADAEKVKSADRAIKQVIHRWTH
LKAVWAEVLPANVYTKSIATLINTVLMHVVEQITRLEDISADDASQLHLIFTKIKEETPD
ILQPPNTEEPVIMEVMVKEWRQFLELGFILEASMQAIVDRWADGKGPLALAFSASTVKGL
IRALFQNTDRRANALSKIKQTS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttagtgacagaagtattgatgaatacaggtttgatggaaaaggaagacctt
gccacaaggattgataaagtttctacccagatctgtgagttgaaagcggagataagtgtt
gccctgaggcagcgctatgtggactttattccatcacaggataagattgaaaagatgcac
tctagagtacggtccttggatactgagatgcatgaccttggggataagatacagggagac
attcgagtgaaactcaaaacatctacaagtgacgttgtggagttaagcaagcaactagat
cagtctaatgcaaccattgctgtccttacaacactttgcaaggctcatcaggatctgaag
gagttcaacacaggtattctttatgaggaatatgtgcaggctgctaacatcttggattca
ctggattgtcaactcaaccttttgtgtagatcaggataccatgagatgaagatagttcat
gctttgaaaagcgaggaaactgttgttagggaaaccttgttcttccatcttggagaatct
tggtcaaagactgtcttgtttcaacctgttgagggcggtaaagggaaaggagccaagtca
gttatcagtcctcagcttgttgtggttcaaaatgagaagtttcagtgtacacttcaagca
atggaaaccacaggctgtcttaataacaaacttgagagttttagtaagaagttacttgag
cacattcttcatccaatcataaggagaacagatatccatctcaacattgaatcaaatcaa
cagaaagtgactatttccatagtgaaggccaaaactgagcaatcttcatccattccatct
ccaacaagtgtctttgatgatatcatcaaggtctttgaagcccttggtacaccactttta
agccatgtagtgaagaaacgaggtcatggtcaggatacaagtatcatgagtattctaggt
tctttaatctggtcaagcatgtctaaagtcctcatcaaggattgcctcactccttctata
ccagctaccagtacagagctgcatgaatacaagttaatatttgatgctacaagaaagttt
gaggagtctctacaaggcttaggctttatcgcacctgattcacaccctcttacagactac
ggcaaaaatgtcaatatccattttgctaataaaaggtgtcaggcattgctggtcgaagct
cgaagattgatgcagcaagatcttcataatactgtacaagttggagggaatgaaataaga
acagatgaagaggggtctggcgaggagaagaatccactgggaccagggttgtcggccttc
ccacaatgtcttatcagtgaaagtgtgcagaaacttctagacatgtgccagcagaccttg
tgtgaggcttccaatagccaggaacaatgctttcaattgtttttcactgtgaggaacatg
ttgcagctcttctgtgaggtcgtacctcattatcataaaacaagtctatatcagctacct
cgagcatcagccctccatcataataactgtatgtatatcagccatcatctattgacgttg
ggtcatcgttaccagcatacctttccgaccccactgtccgacggagcttctttattcgtt
gatcttgtaccagtcttcaggaaagaggctgtcacaccgttccttgctcaaatgagatct
caacgagacttgcttcttgaatctgtgagaatagctgaaggcttccaaagggttgcagat
gcagagaaagtaaaatcagctgatcgtgctatcaaacaggtgattcatcgatggactcac
ctcaaggctgtctgggctgaagtacttcctgcaaatgtttacaccaaatccatagcaaca
ctgatcaacacggttctcatgcatgttgtcgaacagatcacacggcttgaagacatctca
gctgatgatgcttctcagctccatctcattttcactaagatcaaggaggagactccagat
attcttcaaccaccaaacactgaggaaccagtgataatggaggtgatggtaaaagaatgg
aggcaatttctagagcttggtttcatccttgaggcttccatgcaagccatagtggataga
tgggcagacggaaagggtcctctagctctggcattctctgcttctacagtgaagggattg
atccgagctcttttccagaatacagacagaagagccaatgcccttagcaaaatcaagcaa
acatcgtga
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