Lytechinus variegatus (green sea urchin): 121409269
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Entry
121409269 CDS
T11173
Name
(RefSeq) fibropellin-1-like isoform X1
KO
K02599
Notch 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121409269
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF
EGF_TEN
hEGF
EGF_DL_JAG
EGF_2
Reeler
JAG1-like_EGF2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
121409269
NCBI-ProteinID:
XP_041457086
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Position
2:82414496..82450922
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AA seq
1423 aa
AA seq
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MAPRDGFIALLNGIFFAYLLNYHCVGARSTGAPVTMNPDVCSTMTPQHFSDPLRDLSPYA
IIVNGNTYTPSQPLTVTISTAQGAGQFKGILLLARRVGSNDIVGSWSVTDSQNFQTVSCG
QSNNAVTHQNSDLKDLSISFLWIPPSGEASDIFIAATFVQQFSTFWVNVTSSVIQGDPCI
NNQCQNGGFCQPSTGSSPPYICVCSSGFSGQFCQTSSNPCANNQCLNGGACSPSPGPSLP
YTCNCLDGFVGDFCQIAPNSCVDHQCQNGGTCTPSPASGLPYTCICAAGYTGIICQTVSD
PCADSQCQNGGVCDPTPGPDLPYTCNCLDGFVGDFCQIAPNSCVDHQCQNGGTCTPSPGS
GLPYTCICAAGYSGIICQIVSDPCADSQCQNGGVCDPTPGPDLPYTCNCLDGFVGDFCQI
APNSCVDHQCQNGGTCTPSPGSGLPYTCICAAGYTGIICQTVSDPCADSQCQNGGICDPT
PGPNLPYTCNCPTGFSGIICNVPNSDSCEGNQCQNGATCSTIPSGGLTYTCNCPTGFTGI
VCHLVSDVCANNQCENGGICNPTPGSSLPYTCNCPPGYNGDLCHLVAPDPCSSSPCLNGG
TCNTSPGSDLSFICNCRAGYTGATCQIDPCAASQCENGGICDPTPGPTLPYTCNCLTGYT
GVICQTGLDFCTNHDCKNGGSCSPFPGSNPPYFCNCQPGYTGQFCEIAPDPCSGAPCRNG
GTCSNSPGPSLPYTCTCLVGYIGNQCETGVDLCSNNDCRNGGSCNPFPGSNPPYFCDCQP
GYTGQFCEIAPDPCSGSPCQNGGTCSPSPGPNLPYTCTCSVGHIGNQCETALDLCANNQC
MNEGSCSPFPGSNPPYFCLCQPGFSGQFCQTDPCSSSPCLNDGSCSLSPGDGLPYTCNCS
IGYTGEVCETAVGSCTSHQCMNGGSCSPFPGSNPPYFCSCQPGYSGQFCQTAPDPCSGNP
CLNGGTCNPSPGSDLPYNCSCLDGFTGDTCQMAPNLCASHQCLNGASCSPFPNSNPPYFC
LCQEGSSGQFCEIDQCSSSPCMNGGTCKISLGSSLSYTCDCPSGYSGLTCQIASDQCASN
PCMHGASCNPLLGSDPPFFCICPPGYGGQFCETDPCSSIPCLNDGSCSLSPGETLPFTCS
CIAGYTGVVCQTAVTSEVCTSNPCKNDGLCLPSSISDPPFCCICLPGYTGEICDIDVVTT
ISTEALPSCLPNLCMNGGTCISELGLSFCDCVDGFGGNLCEQPDPSINECASNPCLNGGI
CIDGQDSFVCACQIGYSGPWCEEAINECISNPCLYGGTCIDGQASFICRCQAGYYGTRCE
DQSNPPAISPGISPLETTHSPDDPLSGITVEQVAAISAGFALIILISVIVWVAVCIRLQK
DVKKKKDPLSMITTPYAIKDPPVLDLEMQETNQARGDDIYVLS
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaagagatggattcatagccttattaaatggcattttcttcgcttatttgttg
aactatcactgtgttggggcccgatccactggggctccagtcacgatgaacccagatgtt
tgtagtacaatgacaccacagcacttttcagaccctcttcgggatttaagcccgtatgcc
atcattgttaatggtaatacttacacaccttctcaaccgctgacagtaacaatcagtact
gctcaaggcgctggacaattcaaaggtattctcctcctggcccgacgagtgggctccaac
gatatcgtcggttcatggtcagtaacggactcacaaaacttccagacagtctcatgcggt
caaagcaacaacgctgtcacccatcaaaacagcgatttgaaagatttaagtatctccttt
ctatggataccaccaagtggtgaggccagtgatattttcatcgcagcaacctttgttcaa
cagtttagcactttctgggtaaatgtgacgtcatcagttattcaaggtgacccatgtatt
aataatcaatgtcaaaatggtggattttgtcagccttctaccgggtctagtccaccttac
atctgtgtttgctcgtctggattctccggtcaattctgtcaaacgagttcaaatccgtgt
gctaataaccaatgccttaacggaggagcgtgttcaccctctcctggacctagtcttcct
tacacctgtaactgcctggatgggtttgtcggtgacttctgtcaaatagctccaaattcc
tgtgttgatcaccaatgccagaatggaggtacttgtaccccttcccctgcatcgggtctt
ccttacacttgtatctgtgcggctgggtataccggtatcatctgtcaaacagtttcagat
ccatgtgccgacagtcaatgtcagaatggaggggtttgtgatcctactcctggaccagac
cttccttacacctgtaactgcctggatgggtttgtcggtgacttctgtcaaatagctcca
aattcctgtgttgatcaccaatgccagaatggaggtacttgtaccccttcccctggatcg
ggccttccttacacttgtatctgtgcagctgggtattccggtatcatctgtcaaatagtt
tcagatccatgtgccgatagtcaatgtcagaatggaggggtttgtgatcctactcctgga
ccagaccttccttacacctgtaactgcctggatgggtttgtcggtgacttctgtcaaata
gctccaaattcctgtgttgatcaccaatgccagaatggaggtacttgtaccccttcccct
ggatcgggccttccttacacttgtatctgtgcggctgggtataccggtatcatctgtcaa
acagtttcagatccatgtgccgatagccaatgtcagaatgggggaatttgtgatcctact
cctggaccaaaccttccttacacctgtaactgtcctacgggattttccggtattatctgt
aatgttccaaattcagattcctgtgaaggcaatcaatgtcagaacggcgccacctgtagc
acaattcctagtggtggtcttacctacacatgtaactgcccgactggatttacaggaata
gtgtgccacctagtttcagatgtatgtgcgaataaccaatgtgagaatggagggatatgt
aacccaacccctggatcgagtcttccctacacttgtaactgtccaccgggttataatggc
gatttatgtcatttagtggcccccgatccctgttctagtagcccctgtctgaatggagga
acttgtaacacttcacctggatctgatctttcattcatttgtaattgtcgagctggatat
actggtgccacatgtcaaatagatccatgtgccgctagccaatgtgagaatggagggatt
tgtgatcctactcctggaccaaccctgccctacacctgtaattgtctgactggatacact
ggcgtcatttgtcaaacgggtttggatttctgtactaatcacgattgcaagaacgggggg
tcttgtagcccttttccaggttctaatccaccatacttctgcaattgtcagcctggatat
actggacagttctgcgaaatagctccagatccatgttctggtgccccctgtcggaacgga
ggaacttgtagcaattctcctggacctagtcttccctacacttgtacctgtttagttggg
tatatcgggaaccaatgtgaaacaggtgtggatctctgttctaataacgattgccggaac
ggtgggtcttgtaacccctttccaggctccaatcccccatacttttgtgattgccaacct
ggatatactggacagttctgcgaaatagctccagatccatgttctggtagcccctgtcaa
aacggaggaacttgtagcccttctcctggacctaatcttccctacacatgcacatgctca
gttggacatatcgggaaccaatgtgaaacggctttggatctttgtgccaataaccagtgt
atgaacgaaggatcttgtagtccttttccaggttccaacccgccatatttctgtctatgt
caacctggatttagtggacagttctgccaaactgatccatgttctagtagcccatgtcta
aatgacggatcttgtagcctttctcctggagatggccttccgtacacttgtaactgctca
attggatataccggtgaggtctgtgaaacagctgtaggtagctgtacaagtcaccagtgt
atgaacggaggatcttgtagcccatttccaggttccaacccgccatatttctgcagttgt
caacctgggtatagcggacagttctgccaaactgctccagatccatgttctggtaatcct
tgtctgaacgggggaacttgtaacccttcacctggatcagatctcccttataactgcagc
tgtctcgatgggttcactggtgacacttgccaaatggctccaaatctctgtgccagccac
cagtgtctgaacggagcatcttgtagtccttttcccaactcgaaccctccatacttttgc
ctctgccaagaaggatctagtggacagttctgcgaaatagatcaatgttctagtagcccc
tgtatgaatggaggaacttgtaaaatttcactgggatcaagtctaagctacacctgtgat
tgcccatctggatattctggtctcacgtgtcaaatagcttctgatcaatgtgctagtaac
ccgtgtatgcatggagcatcttgcaatcctcttttaggttccgaccctccattcttttgc
atttgtcctcctggatatggtggacagttttgcgaaacagatccatgttctagtatccca
tgtctaaacgatggatcttgtagtctttctcctggagaaactttaccattcacttgttcc
tgtattgctggatacaccggtgtcgtctgccaaacagctgtgacgtcagaggtttgcact
agcaacccgtgtaagaacgatggattgtgcctgccttcctctatttcagatcctccattc
tgttgcatctgtttacctggctataccggagagatatgtgatatagacgtagttactact
atatcgaccgaagctctgccgagttgtttacccaatctgtgtatgaatggaggaacttgt
atttctgagcttggcctttcgttttgtgattgtgtcgatggatttgggggaaacttgtgt
gaacaaccagacccatcaattaacgaatgtgcatcaaacccttgtctaaatggaggaatc
tgcattgatggtcaagattcatttgtgtgtgcatgtcaaatcggttattctggtccctgg
tgtgaagaagcaattaacgaatgtatttcaaacccctgtctatatggaggaacttgcatt
gatggtcaagcttcatttatttgtagatgtcaagctggttattatggaacccggtgtgaa
gatcagagcaaccctccggcaatttcaccaggcatttcacctcttgagacaactcactct
cctgatgatccattatctggaataactgtagagcaagtagctgctatatcagctgggttt
gcactgatcatactaatcagtgtcatcgtttgggtggcagtttgcatacgactccaaaaa
gacgttaaaaaaaagaaggaccccctgtcaatgatcaccaccccctacgccatcaaagac
cctccagtgttggatcttgagatgcaggaaacaaaccaagcaaggggagatgatatttat
gtcttatcctaa
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