Lytechinus variegatus (green sea urchin): 121409527
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Entry
121409527 CDS
T11173
Name
(RefSeq) ATP-dependent DNA helicase Q5-like
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121409527
Enzymes [BR:
lvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121409527
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
121409527
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GFIT
Motif
Pfam:
DEAD
Helicase_C
SRI
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
121409527
NCBI-ProteinID:
XP_041457383
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Position
1:complement(23255394..23280825)
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AA seq
1220 aa
AA seq
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MPKVSKKSTSQGSKITDFLTNKTGVDTGAKRSTEGASKSCPKKIPTDKGRVDPKLTSSFA
QLQETLENVFGYASFKSELQKKGTEEVFKGKKDVFISMPTGAGKSLCYQLPAVCKKGVTL
VISPLIALIEDQLSHLDEINIRAESLNSKIPAAKRKMVISDLCSKKPKIRMLYITPETAA
TSTFKTILKNLDNKGLFSGIVVDEAHCVSQWGHDFRPCYLKLGALHKAYPTVPCVALTAT
ATANVRKDIVNELHLRTPVVEFRAGCFRENLFYDVIYKDVLEDPLGHLKDFGLKLLQKDE
TLGDASGCGIVYCRTRDACVTVAGSLSRQGLTARAYHGGMKAADRTSVQEQWMNGKVKVI
VATISFGMGVDKATVRFVAHYNIPKSMAGYYQESGRAGRDGKPSRCRLYYSRQERNQVAF
LITQEIACANSKKRKAKYSASPVKPSKAPMQSFEALVKFCEEAKCRHESIAKYFDDKLPS
CGSMCDVCKTPQVVKKRIDEMQRGIMGGPAKKNHMGRTYIEKNPLNVHDDELYGGGRYGR
DVTYVGTKRKPADWSDDDDYNTDEDDDDDGNRSGMRDLVQAEFRRRKKKKIKADTQQTEE
IDPNCKLKNPQSSKVPGLTIKVREHCMQLLEKALRANINAAFSDESNGLTSNDYKIQRCA
ISAEYSAMEAAKTCNLYKAKVFGQVGEIGKKTKEGRLHDLFISVTDEEDTLKEPLSCTAP
SSTASDGPRLPALPGFCTAASLLAASAPKRGEDNSRQTTLNFGPPAKGSGLRKKGEAQTK
VKSSGGFVKASALVMSDGQVKKRKREGMDGGLAAEEEGMEGLWIGDAGAERTPEGVEMDD
VEGFEDGDCDDNLGCSFLEGEEFDVEEYDAADEDLEDNDSLVDSKVERSDGRDSTRLPMK
KKCMETIAHMEDCRTKKQGEPTHHDNLISKISTVPDEHPHLHASEATRTGGQSSEVQSLE
NGFDTGITGRTGTTDSNMTRRSRGALCSQEDILSEDCTKNNTSASLTSKNLDVVQKEDSL
SVPRNNPIVVKGAAIKSESGGLIVNQNGFVGSHGTTRDSCKSGNAADCTPGVGEGTSSRE
TEIKSSLSIRRLNPMDNSALTGSPRKHVTFDPKVEDNERATGESLEDKRQENKMSQGLNK
IVADAVVKYLTPHYKEGKIASKPLFKSLARCLSHQLTDNKLVTKATVKKHAKGLVRDYFK
HQEKCLTEDDIPTDSMTQPT
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggtttcaaagaagagcacctcgcaagggtctaaaatcacagattttctgaca
aacaagacgggcgtcgatacgggagcgaaacgttcaactgagggagccagcaaatcatgt
ccgaaaaagataccaactgacaagggcagagttgatccaaaattgaccagctcttttgct
caactacaagaaactctagaaaatgtgtttggttatgcatccttcaaatctgagctgcag
aaaaagggaacagaagaagtatttaaaggcaaaaaagatgtttttatatctatgccaacg
ggagctggaaagtccctctgttaccaattgccagcagtatgcaagaaaggcgtaactctt
gtcatctctcctctcatcgcactcatagaagatcagttgtcccatttagatgaaatcaac
atcagagccgaaagtctcaactccaagatccctgcggccaagagaaagatggtgatctca
gacctttgcagcaaaaaaccaaagatcaggatgctctacatcaccccagaaacagcagca
acctccaccttcaagaccatcctcaagaaccttgataacaaagggttgttcagtggcatc
gtagtggacgaagcccactgcgtgtcacagtggggccacgacttccgaccttgttacctc
aagctgggggcactccacaaggcgtaccctaccgttccctgtgtcgctctcaccgcaacg
gcaacagcgaatgtccggaaggatatcgtaaatgagttgcatctgagaacccccgttgtc
gagttcagggcgggctgtttccgagagaatctcttctatgatgtgatttacaaggatgtc
ctggaagatcccttgggtcacctcaaagactttgggctgaagctgctgcagaaagatgaa
actcttggggatgcgtcgggctgtggaatcgtctactgccggaccagggatgcctgtgtc
acagttgcagggagcctgagccgacagggactgacggcgcgggcgtaccatggaggaatg
aaggctgcagaccggacgtcggtccaggaacagtggatgaatggcaaggtcaaggtcatc
gtagcaaccatcagctttggaatgggtgtagacaaggcgacagtgaggtttgtggcacat
tacaacatccccaagtctatggctggctactaccaggagtcgggtcgagcgggacgtgac
ggtaaaccgtcccgatgtcgtctctactactctaggcaggagagaaatcaagtagctttt
ctcatcacacaagaaatagcatgtgcaaatagcaaaaagagaaaggcgaagtattcggca
tcacccgtcaagcccagcaaggctccaatgcagagtttcgaggcacttgtcaaattttgt
gaggaagcaaaatgcaggcatgaatccattgccaagtactttgatgacaagctgccctcg
tgtggcagtatgtgtgacgtctgcaagacgccgcaggtcgtgaagaagcgcatcgacgag
atgcaacgtggcataatgggtggaccagcgaaaaaaaatcacatgggacggacatatata
gagaagaaccccctcaatgttcatgatgatgaattgtacggtggtggccgctatggtaga
gatgttacgtacgttggcacgaagagaaagcctgcagactggtccgacgatgacgactat
aacacagatgaagatgatgatgatgacggtaatcgttctggaatgagagatcttgtgcaa
gcggaattcaggaggagaaaaaagaagaaaataaaagcagatacccaacagacagaggaa
atagatccaaactgtaaattgaaaaatcctcaaagctccaaagttccaggacttactatt
aaggtgagagaacattgtatgcagcttcttgagaaggctttgagagcaaacatcaatgct
gccttctctgacgagtcaaatggtctcacctccaatgactacaaaatccaaagatgtgca
atatcagctgagtactcagccatggaagcagccaagacatgcaatctatacaaggcaaaa
gtatttggtcaggttggagaaattggtaagaagacaaaagaaggccgtctgcatgatctc
tttatttctgtgacagatgaggaggacacattgaaggaacctctgtcatgcacggctcca
tcaagcactgcatccgatggcccaaggttaccagcgcttcccgggttctgcacggcggcg
tctctgcttgctgccagcgcacccaagagaggtgaagacaactccagacagacgactcta
aactttgggccacctgccaagggaagtggtcttagaaagaaaggggaggcccagaccaag
gtgaaatcgtcagggggattcgtgaaggcatcagctttagtgatgtcggatggacaggtg
aagaagaggaaacgggaggggatggatggtggcttagcagctgaggaggaggggatggaa
ggtctgtggattggtgatgcgggagcagaaagaacccctgagggtgttgaaatggacgat
gtggagggctttgaggatggggactgcgatgacaacctagggtgcagcttcctggagggg
gaggagtttgacgtggaggaatacgatgcagctgatgaagacctagaagataatgattcg
ttagtggacagtaaagtggagaggagtgacggcagagactccactaggttgccaatgaaa
aagaaatgcatggaaacaatcgcacatatggaagactgtaggactaagaagcaaggtgaa
ccaacacaccatgacaacctaataagcaagatatctactgttcctgatgaacatccacac
ctacatgcttccgaagccacaaggacaggaggacaatcaagtgaagtgcaatcgctagaa
aatgggtttgatactggcattacaggtagaacaggtactacagacagcaacatgaccaga
agaagtaggggcgcactatgctcccaagaggatatcctttctgaagactgtacaaaaaac
aatacatcagcatcattgacatcaaagaatctggatgttgtccagaaagaagacagtctt
tctgttccaaggaacaatcctatagtagtgaaaggggcagcaataaaatcggaatctggt
gggttgattgttaatcagaatggatttgtaggatctcatggaacaacaagggacagctgc
aaatcaggcaatgcagctgactgcactccgggagtaggtgaaggcacatcttctagggag
acagagatcaagtcgtcactttccatcagaagactgaaccctatggacaacagcgccctc
acaggtagtccaagaaaacatgtgacctttgaccccaaggttgaagacaacgagagagca
acgggagagtcgttggaagacaaacgccaggagaacaagatgtcgcaagggctcaataag
atcgttgccgacgctgtcgtgaagtacctcactccccactacaaagaaggcaaaattgct
tccaagcctctattcaagtctttggcaagatgtttgtcacatcagctgactgacaataag
ctggtcaccaaagctacagtgaagaaacacgcaaaaggactggttcgtgattacttcaag
caccaagagaaatgcctgacagaagatgatataccaacagactcgatgacacaacctact
tga
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