Lytechinus variegatus (green sea urchin): 121409941
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Entry
121409941 CDS
T11173
Name
(RefSeq) probable cysteine--tRNA ligase, mitochondrial
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121409941
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lvg01007
]
121409941
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvg03016
]
121409941
Enzymes [BR:
lvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
121409941
Amino acid related enzymes [BR:
lvg01007
]
Aminoacyl-tRNA synthetase
Class I (G)
121409941
Transfer RNA biogenesis [BR:
lvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121409941
Prokaryotic type
121409941
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DALR_2
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
121409941
NCBI-ProteinID:
XP_041457670
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All DBs
Position
1:complement(24997068..25017701)
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AA seq
605 aa
AA seq
DB search
MGLRIASDLFGRHGIICSLGLTSGYRSRKTLYLRRDVCSPSSASCHSHFSQARYPVQRDG
ENTVCVLNSLSAAQDRKSAKKEPLLLMNKNVATWYACGPTVYDSAHIGHASSYVRFDIIR
RILAEFFQTSIVMVMGITDIDDKIIKRSQEQKIEDFRELARFYEREFYQDMQYLNVLPAT
VYTRVSDHIPDIIAFISKIIRNGFGYTTSNGSVYFNVDAFTLERYNKLASQDLDVQHDDG
KEMIDPEKRHPRDFALWKGVKPGEPWWEAPWGKGRPGWHIECSAMSHAIFGERLDIHTGG
RDLAFPHHNNEIAQCEACFNSGQWANYFLHSGHLYRKHDIDKMSKSLQNVVSIQEFLKTY
TSNQFRFLCLMSKYDHDLEYGSGTMQQAVVLHRQMSAFLNDADAYVKGQICCRPFNEAEL
MQRLENTQDEVIGALADDFDTKRALDCIMKLAHTCNSNFSQVSEEASSRSPGAVAAVATY
INQVLSNLGLQMSTRSGTHSGQSSQAMNTALDTLVNFRQDVRRWALTDQEDHGISSVIQS
SNGDSEEMRLRRKKLMKERAPLLNACDHVRDTLAQNGIQIKDRGASATWEFVEKTKVKTE
DGTDR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgagaattgcaagtgacttattcggccgacatggcataatttgcagtttaggt
ctaacttctggatatcggagccggaagactttgtatttgagaagagatgtctgctcccca
tcatctgcttcctgccattcccatttctctcaagccaggtatcccgtgcagagagatgga
gagaacactgtctgtgtcttgaactcattatcagcagcacaagatcggaaaagtgcaaaa
aaagagcctctgctactgatgaacaaaaatgttgcaacatggtatgcttgtggtcctact
gtttatgattctgcccatattgggcatgcaagctcttatgtcagatttgatatcatccgt
cgcatcttagcagaattcttccagacgagcattgtcatggtgatgggtatcactgacatc
gatgataagatcataaaacgttcacaggagcagaagatagaggacttcagagaattagct
agattttatgagagggaattctatcaagatatgcaatatcttaatgtcttaccagcgact
gtctatacccgggtatcagatcatataccagacattattgctttcatcagtaaaatcatc
agaaatggctttggatatacaacaagtaatggtagtgtgtacttcaatgtggatgcgttc
acactagaaagatacaacaagcttgccagtcaagacttagatgttcagcatgatgacggt
aaagagatgattgatcctgagaagagacacccaagggactttgctctgtggaaaggagtc
aagccaggagaaccatggtgggaagcaccatggggaaagggaagaccaggatggcatatt
gaatgttctgctatgtcgcatgccatctttggtgagcggttagatattcatactggtggg
cgagatctagccttccctcatcacaacaatgagatagctcaatgtgaggcttgctttaac
tctggtcagtgggctaactacttcctacattcaggtcatttatacaggaaacatgacatt
gataagatgtccaagtcccttcagaatgttgtgagcatccaagagttcttgaagacttat
acctcaaaccagttcagattcctgtgtctaatgtccaagtatgatcatgatttagagtat
ggatccggtacaatgcagcaagctgtagtacttcatagacaaatgtcagctttcctcaat
gatgccgatgcgtatgtcaaaggtcaaatatgctgtagaccatttaatgaagctgaactc
atgcaaaggttggagaatactcaagatgaagtgataggagcattagctgatgattttgat
acaaagagggcactagactgtattatgaaactggcccatacatgcaactcaaatttcagt
caagtatcggaggaggcgtcaagtcgcagcccaggggcagttgcagctgtagctacatat
atcaaccaagtcttatctaacttaggattacaaatgtctacaagatcaggtacccattct
ggtcagtcatcccaagcaatgaacactgctctagacactctggtcaactttagacaggat
gtccgtcgatgggccctcactgaccaagaggatcatgggatatcgagtgtaattcagagc
agcaatggggattctgaggaaatgaggctgagaagaaagaaactgatgaaagagagggct
ccactcctcaacgcatgtgatcatgttagagatacgctagcacagaatggtatacagatt
aaggatcggggagcatcagccacatgggaatttgtagagaaaacaaaagtgaaaacagag
gatggaacagacaggtga
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