Lytechinus variegatus (green sea urchin): 121410001
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Entry
121410001 CDS
T11173
Name
(RefSeq) F-box/LRR-repeat protein 5-like
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121410001
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121410001
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GFIT
Motif
Pfam:
F-box-like
F-box
Hemerythrin
DUF7885
LRR_6
LRR_4
LRR_8
F-box_4
Motif
Other DBs
NCBI-GeneID:
121410001
NCBI-ProteinID:
XP_041457741
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Position
3:3292281..3330722
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AA seq
639 aa
AA seq
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MELQNKMAPSPAPSEIDVFSGPHSRMKRLVQLYSEKLSEVDLSSCSDLRSLLWSLKATFS
EFKTHEHIENECIMWRLKNRLQFLKVEISAVSEVHSDNKLSEMVELVENACCQAEKCNFS
RQAAQIGQNLISALRNFTEDFLPHMQEEEEIFQPLLMEYFSYSELKEIKSDVIDRHQKLT
KYCPEEKKELEDNTVPSDASEKEQVLNEEIEEDNTLSKIQGLPAELLLQIFSHLNPLDLS
QCSMVCTRWAGVARDPSIWKHLYPSRWAKGDWQFGASIHLSEDNDCQSFHEEDVYVVIDE
DADFDESASSAIESDASNASMISYRAECIRREARMLVAMAKYLIPHVGAGVETIILSNSK
GVTNGLVYKLLVQCPNLKYLDLSETKISDIAFKGLGRNGVGSKLKHLDISGCVNITDTTL
KRLSSIRQALLTMPDNQIIDSPKADCQHGISDKNGRPLNVDGAHDQRDQGCCSIRHCDAQ
NDTDIVSRMPPETCDSGCHLKSDVIHSQRLSVDSAPRTKSRHVGRHDRSSDREGEHSDGG
GKLSRQLEFLSLSGCYRITDDGLRSLSQGGNWPNLNHLDLSGCLNVTGAGLSVLVSVCPT
LNHETFYYCDNIEEGPYADTASGCQNLQCGNRVCCRLGE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaactccaaaacaagatggctccatctccagcaccctccgaaattgatgtgttttct
ggaccacatagccgcatgaaaagacttgtccagttgtattcagaaaagttatcagaagtc
gatctttcaagctgttctgacctccgttcattgctatggagtttgaaggcaactttctct
gagtttaaaactcatgaacacattgagaatgaatgcattatgtggagactgaagaacaga
ttacaatttctcaaggttgagatatcagctgtgtctgaggttcattctgataacaagctt
agtgagatggtggaactagttgaaaatgcctgctgtcaagctgagaagtgcaatttctcc
aggcaagcagcccagattggccaaaaccttatctcggctctccgtaatttcacagaggat
ttcttgccccacatgcaagaggaggaagagattttccagcctctattaatggaatatttc
agctacagtgagcttaaagaaattaaatctgatgtgattgacagacaccagaaactcacc
aagtactgcccagaggaaaagaaagagttagaagataatacggttccaagtgacgcctct
gaaaaggagcaagtattaaatgaagagatagaggaggataacacattgagtaagatccaa
ggtcttcctgctgaattgctgctacagatcttttctcaccttaacccattggatttgagt
caatgtagcatggtgtgtacccgatgggcaggagtagcaagagatccatctatctggaag
catctatatccatcacgctgggctaaaggtgactggcagtttggtgcatcaattcacctc
tctgaagataatgactgtcaatcctttcatgaagaagatgtttacgttgtcattgatgag
gatgctgattttgatgaatctgcttcatcagcaattgaaagtgacgctagtaatgccagc
atgatcagctacagagcagaatgcatcagacgggaggctcgcatgttggttgctatggca
aaatatctgatacctcatgttggagctggtgtggagacgattattctgtctaatagcaaa
ggagttactaatggcttggtttacaagttacttgtccagtgtcctaacctgaaatatctc
gatttgtctgaaaccaagatatctgacattgctttcaaagggcttggaaggaatggtgta
ggtagcaaactaaagcacctggatatctctggttgtgtaaacatcacagacacaaccctc
aagaggttatcatctattagacaagctctactaactatgccagataatcagatcatcgac
agtcccaaagctgattgtcagcatggtattagtgacaaaaatggccgaccgctgaatgta
gatggtgcccatgatcaaagagatcagggatgttgctcaattaggcactgtgatgcacaa
aatgatacagacattgtaagcagaatgccgccagagacatgtgacagtggttgtcatttg
aagagcgatgtgatacactctcagagactatctgtagattctgctccaaggactaagagc
cgccatgttggcaggcatgataggagcagtgatagagagggagaacatagcgatggtgga
ggaaagctatcaagacagcttgaattcttgagtctatcaggatgttacagaatcacagat
gatggactaagatcactatctcaaggaggaaactggcctaatctcaaccatcttgatcta
tctggatgtcttaatgtcactggagctggtttatctgtattggttagtgtttgcccaacc
ctcaatcatgagaccttttactattgtgataacattgaagaaggaccatatgctgataca
gcaagtggctgccagaatcttcaatgtggtaacagggtatgttgtcgtcttggggaatag
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