Lytechinus variegatus (green sea urchin): 121410006
Help
Entry
121410006 CDS
T11173
Name
(RefSeq) protein NEDD1-like
KO
K16547
protein NEDD1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lvg03036
]
121410006
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121410006
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
121410006
Microtubules and associated factors
gamma-tubulin ring complex
121410006
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
121410006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_VPS8
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_RFWD3
EIF3I
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_LRRK2
WD40_like
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_ACSF4
eIF2A
THOC7
Mei5_like
Motif
Other DBs
NCBI-GeneID:
121410006
NCBI-ProteinID:
XP_041457749
LinkDB
All DBs
Position
3:complement(3474949..3496458)
Genome browser
AA seq
668 aa
AA seq
DB search
MEEGPVRFASGGDDIKIWDLSSSAPQQQFSPHAGPISSLCWSHNNQLLASASSVGDKIVL
SYGKSLSANVIELAVGDKQTCLSINSTSRYMVCGGKNKLISIWDVKNKKLKRTYKEHRDS
VSCVIFNWNDSYLASGSASGEILLHNVVSGQPGSPMLVSNGQTVRDVGYSYFKKSLLAAA
SDDGSLTLWDTNTSKLVTSFSDAHNAPATALSFSPLNNLLLASSGLDKRVVCYDVNGRSV
IKTMAVESPLTSLSFMQDGATLAAGSTRGKIYVFDLRKGSSPLNTLNAHKSSVQAIKFQK
PNGAPKINGPVSKSRTASSHKKTSSSSSSSIQMNEANEPTSLIPDNVKASKESLNERTNG
DPSPRYEQMDNMDIISPIREGGDSTTVRTSVRNGSITDDRPETMGKAETQQRNNSLPGAG
IFSPLSSELDNPNIDSSLRRNPIGSVAIESSPFGQIRRAFPNNLDGVDNGTTTSNSVRFR
SPLHSPVDVPSPRRTSFPNTVMDMRHIPASLNIHPVRVESDVRMEGDERLASPVTTPTIH
KPVFSPEEPPKSSFSRRHPSPSPPLTSGDVESRLNEGVTGEVMGSSVQNTPFQTFQVDFI
KNLIEESLDQFRVAIHRDVTNLQLEMLRQFQIQQTEIQALLQRYSVNEGLLSEIETLREE
NKRLKNKY
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggaccagtgagatttgcttctggtggagatgatataaagatttgggatctc
tcaagctctgctcctcaacaacagttctcaccacatgcgggaccaatctcaagcctatgc
tggagtcataacaatcagcttttagccagtgcatcgtcagttggggataagattgtgctc
tcctatgggaagagtctatcagcaaatgttattgagcttgctgttggggataagcagaca
tgtctttctataaattccacgtcacggtacatggtctgtggaggcaagaacaagctaatc
agcatatgggatgttaaaaacaaaaagttaaagaggacatataaggagcatcgagacagt
gtgagctgtgttattttcaactggaatgactcttacttagcatcaggatcagcgagtgga
gagattttacttcacaatgtagtatctggtcaacctggatctcctatgcttgtctcaaat
ggacagactgtccgagatgttggttactcctacttcaagaagtctctccttgctgctgct
tctgatgatggtagcctaaccttgtgggatactaacaccagtaagctagtaacgtctttc
agtgatgcccacaatgcacctgctacagctctctcattctctccactcaataatctcctt
cttgccagttcaggcttggacaagagagtagtctgttatgatgttaatggcagaagtgtg
ataaagacaatggctgttgaatctcctctgacatcactctccttcatgcaagatggagca
acattagcagctggttctactcgaggcaagatctatgtctttgatctgcgaaagggatct
tctcctctcaatactcttaatgctcacaaatcatcagtgcaagcaataaaatttcagaaa
cctaatggagctcccaagataaatgggccggtaagcaaatcaagaacagcgagttctcac
aagaaaacatcatcatcatccagctcatcaatccaaatgaatgaagccaatgaaccaacc
tcattgatacctgataatgtaaaggcttctaaggaaagtttgaacgaaagaactaatgga
gatccttctccgcgatatgaacagatggacaatatggatatcatctcaccaattagagaa
ggaggtgactctacaacagtaagaacatcggtaagaaatggatcaattactgatgataga
cctgaaactatgggcaaggctgaaacacaacaaagaaataatagtttacctggagcaggt
atattctcacctctatcatcagaacttgataatccaaatattgacagttcactaaggaga
aatcctattggatctgtagccatagaatccagcccatttggacaaatcaggagagctttt
ccaaataacttggatggtgtagataatggcacaacaacatcaaacagtgtcagattcaga
tcaccattacacagtccagtagatgttccctcgccaaggagaacatccttcccaaatact
gtgatggatatgagacacatcccagcatcccttaatattcatcctgtacgagtagaaagt
gatgttagaatggaaggagatgagaggctagcatcaccagttaccacgccaactattcac
aaaccagttttttcacctgaagagccccctaagtcatcattctctcgaagacatccgtcc
ccatctcctcctctgaccagtggtgatgtagaaagtagattgaatgaaggagtgacagga
gaagttatgggaagctcagtgcagaataccccatttcaaacattccaagtagatttcatc
aaaaacttgatagaagaatcattggaccaattcagggttgctatccatagagatgttacc
aatctacaattagaaatgctcagacaattccaaatacaacagactgaaatacaagcatta
ctccagcgctattctgttaacgagggcctcctttcagagattgagactttgcgagaggag
aacaagagattaaaaaacaaatactga
DBGET
integrated database retrieval system
