Lytechinus variegatus (green sea urchin): 121410025
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Entry
121410025 CDS
T11173
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2-like
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121410025
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121410025
Factors involved in mRNA localization
Other mRNA localization factors
121410025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
121410025
NCBI-ProteinID:
XP_041457778
LinkDB
All DBs
Position
3:complement(4150290..4210145)
Genome browser
AA seq
1281 aa
AA seq
DB search
MSNGPENGPGQGQGQGSPIVPLEEAISNVDLLSDLPTPDPQPMIEAKTIALTYHANFDTN
FSDRTAFITGIAKFMEEATVHSEMNNILKEGEEHAVMLYTWRSCARAVPSIKSNLQENRR
EIKETFIEIMKPEIAKLIAFMHFQERAINEFCEDFKRLCHIERRNDFVSESYLLTLGRLM
NMFAVLDALKDSKASIRNDNSAYNRDANFLRSAIDIAAVQESQKMTMFLATNQSITNTLK
ATLVKIEGYEDMIADVVNLCVKLFDNDQFVLPAEKHLLVKVIGIGLFLMDNETNSIYSQK
NKLNLSRIDKIFKKLEVVPLYGDLQISVLSYIKKCGNYETHQSFWKSENITATGSQFNIL
RQQTSLRDEHTKYLAQLVKYNKTHPKWKISEAQNNDKPKMRSDAENKVIYDLALEGLRLL
SKLTALVTEMFSWKLLHPSTSHKPEVEKAEEYEKATRFNYNQKEKFALIEIIAMIKSLQA
FMSKMEPFFQDAIHRHIYSEIQDFVQLVLREPMRAAVKRTKKKKGTLILSIIRGVRESCC
DWLEGQQPSDDPILKGDKDPKSGYTPKKVPRKSIGPSTTQLYMVRTMLECLTADKGGSGK
KTLRKELQDLVPIEPFEKFLEASFFYLHMINLPDTIRRCGDLSQLWYREFYLEMTMGKHI
QFPIEMSIPWILTDEILTAKEPALMEYVFFPLDLYNDSAQYAVAIFKKQYLYDEIEAEVN
LCFDQLVYKLAEMIFAYYKELAGSMLLDRRFRKECKKYGIDIPCQQANKYDSILRQKHVQ
ILGRSVDMSRLLSQRIIQSILKSLKLAISRFEGHGINEGLIELDCLIQINQLAHMMMSKH
LMLPSFQSLVDEADSNVGGPCGTMALNLALDLSSEILPKYCFNGTTQRFVRTKLMFVEET
SKDKPANAQPAYYFGSKTLNAVYQQIAGLYQGFMGMEHIRIMVRLLGYQQLHVVVEELLK
IVKGTIQTLCLPYVKVLLQEAMPAKCKMPKTEYGTQGLVVYYYTHVQDVVQYSDLKTHTL
GAFQSVGNAVIFFHLLDQVLNVEEAFSLFQASPFMNILPKPYCAKGEKLETKIKQMEQNY
APLHICPLMQKLGTKEQLRNAQENDLLLRERGACGTIIFKEILNRIRTFLDDPVWRGQTE
PENGVMHVDESNLEFHRLWSAIMIVICMPLNTNNTSVEEGYGDGLNWAGCTIMTLLNQAR
KFQLLDFASHIQRVNEVDGKLADINGICVKRYVDRIGKYQTLNQQIFEVLNKALEMGESE
TSTSNVTFYQPPLHESQVKNM
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatggaccagaaaatggacctggtcaaggacagggccagggatcacctatagta
cccttggaagaggctatatccaatgttgatctgttaagtgacctaccgacccctgaccct
caacctatgatcgaagctaagacaatagctctgacctaccatgcaaactttgataccaat
tttagtgataggactgcttttattactggtattgccaagttcatggaagaagcaacagtg
cattcagaaatgaacaacattctgaaagaaggggaggaacatgcagttatgttgtataca
tggaggagttgtgccagagccgtaccttcgatcaaatccaatctccaggagaacagaaga
gagatcaaagagacattcattgaaatcatgaaaccagagattgcaaagcttattgccttc
atgcattttcaggaaagggcaattaatgaattctgtgaagacttcaagagattgtgtcac
attgagagaaggaatgactttgtatctgagtcttaccttctaacccttggtagacttatg
aacatgtttgctgtacttgatgcgttgaaagatagcaaagccagtattaggaatgacaac
tcagcatacaatagggatgctaacttcttgaggtcagctattgacattgctgcagtccag
gagtcccagaagatgacaatgttcctagccactaatcaatccattacaaacactctcaaa
gcaacactagtcaagattgaaggatatgaagacatgattgctgatgttgttaatctttgt
gtaaagctctttgataatgatcagtttgtgttaccagctgagaaacatctccttgtcaag
gtgataggaataggtctattcctgatggataatgagaccaacagtatctacagtcagaag
aacaaactcaatctttcaaggattgacaagatctttaagaaactggaagtggttccgctg
tatggagatcttcagatctctgtcctgtcttacatcaagaaatgtggcaattatgaaacc
catcagtccttctggaagagtgaaaacatcacagctactggttcacagttcaacattctc
agacagcagactagtctaagggatgagcataccaaataccttgcacagcttgtcaagtac
aacaagacacatccaaaatggaagattagtgaggcacagaataatgacaagcccaaaatg
agaagtgatgctgaaaacaaagtgatctatgaccttgctctggaaggattaagattgctc
tctaaactcactgcactagttactgaaatgttctcctggaagcttcttcatcctagcaca
agccataaacctgaggtagagaaagcagaggaatatgagaaggcaacacgattcaactac
aaccagaaagagaaatttgctctgatagagatcattgctatgatcaagagtcttcaagcg
ttcatgagtaagatggaaccattctttcaagatgctattcatcggcatatctacagtgag
atacaagactttgttcaactggtcctgagagaaccaatgagggcagcagtcaagagaaca
aagaaaaagaaaggcactcttatcttaagtataatccgaggagtaagagagagttgttgt
gattggctagaaggtcagcagccatcagatgatccaatcttgaagggcgacaaggatcca
aagagtggctatactccaaagaaggttcctaggaaatcaattggaccatctacaacacag
ctatacatggtacgaaccatgctggagtgtttaacagctgataagggtggttctggcaag
aagactttgagaaaagagctccaggatcttgtaccaatagaaccatttgagaagttcctt
gaagcttcattcttctatcttcatatgatcaatctaccagatacaatacgtagatgtggt
gatctgtctcagctttggtacagggaattctacttagagatgaccatgggaaaacacatt
cagtttcccattgagatgtctattccatggatcttaactgatgagatcttaactgccaaa
gaacctgcactcatggaatatgtgtttttccctctagatctgtacaatgacagtgcacag
tatgctgtagcaatattcaagaaacagtacctatacgatgagatagaggctgaggtcaat
ctgtgttttgatcagttggtatacaagttagctgagatgatctttgcttactacaaagaa
ctggctggaagtatgctactagatagaagattcaggaaggagtgtaagaagtatggtatt
gatattccatgtcagcaggctaacaagtatgacagtatcttgagacagaaacatgtacag
atccttggtagatcagtggatatgagtagattactctcccagagaatcatccaatcaatc
cttaagagtcttaaattggcaatctcaagattcgaaggtcatggcatcaatgaaggtctc
attgagcttgattgtctaatccagatcaaccagttagctcatatgatgatgagtaaacac
ctgatgttaccatcatttcaatcactagtagacgaagctgatagtaatgtaggaggacca
tgtgggactatggctcttaatctagccttggatcttagcagtgagatcttacctaaatac
tgcttcaatggaactactcagaggtttgttcgtaccaagctcatgtttgttgaagagaca
agcaaggataaaccagccaatgcacagcctgcctattactttggaagcaagaccttgaat
gcagtatatcagcagatagctggtctttatcaaggtttcatgggaatggaacacatccgc
atcatggttcgtctccttggttaccaacagcttcatgtcgttgtagaagaactactcaag
attgtcaaaggcacaatccaaacattatgtctaccttacgtcaaagtgctccttcaagaa
gctatgcctgccaagtgtaagatgccaaagacagaatatggaactcaaggtctagtagta
tactactatacacacgtccaggatgtcgtccagtattcagatctgaagacccataccctt
ggtgctttccagtcagtaggcaatgctgtcatcttctttcatctactagatcaggtcctt
aatgtagaggaagcctttagtttgttccaggcgtcgcctttcatgaacatcttacccaag
ccttactgtgcaaagggtgagaagctagaaaccaagatcaaacagatggaacagaactat
gcaccccttcacatatgtcctctcatgcagaaacttggtacaaaagagcaactgcgcaat
gcccaagagaatgatcttctactgagagagcgaggtgcctgtggaactatcatcttcaag
gagatcttgaatcgtattaggacattccttgatgatccagtatggagaggtcaaactgaa
ccagagaatggtgtcatgcatgttgatgagagtaatcttgaattccatcgtctatggagt
gctatcatgatagtcatctgtatgccactcaataccaataacaccagtgtagaagaaggt
tatggagatggtctgaactgggctggttgtactatcatgacactcctcaatcaagcaagg
aagtttcaactgttagactttgcttctcatattcagagagttaatgaggtcgatggcaag
ctagctgacatcaatggaatatgtgtgaagaggtatgttgaccgcatcggcaaataccag
accctcaaccaacagatatttgaggttcttaacaaggctcttgaaatgggtgaatctgaa
acatctacatcaaatgtcacattctatcaacctcctctccatgaatcacaagtcaagaat
atgtaa
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