Lytechinus variegatus (green sea urchin): 121410029
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Entry
121410029 CDS
T11173
Name
(RefSeq) Fanconi anemia group D2 protein-like
KO
K10891
fanconi anemia group D2 protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121410029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121410029
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
121410029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
FtsA_C
Motif
Other DBs
NCBI-GeneID:
121410029
NCBI-ProteinID:
XP_041457783
LinkDB
All DBs
Position
3:4279624..4341054
Genome browser
AA seq
1462 aa
AA seq
DB search
MAKSKGKPKRQRESLPEENPTSTEGAVKAKRARTSADKGRSSNVAPIVDKSTFGKMVMDA
GFCLIAGDHPNQLNVDQVMFQKKLRKSVKSRMNVGETVEDFISGLQNHIEDPVRFKYSLL
PTCSSAECESARGGNQDSLIRLILAIDELQPALVNMLLEKLPEFMGEEDSMFDYSEAVDL
PKLILNQFHWMDNVINSKEMTDKMLEMVEISSPSVQREIIACVPEVVSDQEHNELANRLK
NMLECNSQLTVPIIDALDNLNLTPELLREVRGSALQSLVSADLDDLPVVIKFILQSVSST
DSLEVISELRRNLDFHTSLPPSSASTPFARSSTSGNASSHKKTVDSEMLILETIKSTMRF
NKVLADGWQKAIENVSDAVGHKVLDIFVLLISHAVANRKKSVEAVFRHKVRKGHFTEELL
QATFTSHAQVIRDYLGSLLCIAEKLLRSPEPQVSQFGSKVYQTAFNAFDVYSKQEVVGAL
VTHIGSGLSDEMDSALDILSYLAASHTKDLAPFAVFIKGVLDYLDNLSMTQVKKLFSVLA
ILAYRGGSSGSTLQDELQIVVRKNLTSNSPKYKRMGVVAALMVIQNMARKGIDSGSGKQA
LASLPQDIFKQVIGLLDLVKSSCGQAPEAAALFFDELANIVQKGDLHPKILETVGENILD
DFQTDFVVDIEAEATTVNYGLPMGEMYSMEGEESQGGVAINLLPLIYKAEKDKQKTVAQN
KKAQRCVSPACLAPHFRLLRFCEQAQHDGSLEGIDALLGCPLYSSKDDLVAKIHSLSKQE
KELMSTNLFLCINWFREAINGFATLQDPEMRGKVLGRLQNITRLQELLETCLEATPGFIP
PVAHFDCEQPQTSPLMTAQNSSSSSKGGKKGRKPKDDKKKGDEDTSESTVLTEYDYVSQE
NNKPNDTTMADPMKEGSKKSNKDTPIIDWSRSRAFFRELDLDVFSVLGCGLVSRTILDTE
MNTKEVHVLQLQPRELEFLLQDLNSKLDHALPASLGRRTFLKSKWDKTIGFSHLDQLSPK
QVAKKAVKMLPLLCQHLEATSGFFQTLMAQNDGMIDGPGWNTEEAHQMGRCLHLLLQALL
ALFSWSGFVSSVNQSIFEEAMATLSSRIADAGKTSFTFTQSLKHAAHYIENFSGTVPNLA
IGVTILKVMVSINNKGSTPAANKKIATLAESLLKRDWLDEDGVREKGAKYNELLQTVIEI
YLHHSEDSLSSVEMLCTEALPELDPSDKNVASALFPTLNRNTLSCYYHVMLKELVSCVQR
LQPSMRKSPDVQGETFDRWRSSVKVFSALVNVIKVFDLRNNIKTLLKYGRMFLDIFLRHA
MPLLDKLFRIEKDDVQALLKMLQQCTRYLQHICSHSKVAKDIALTSHVPQMKRLLEQFVY
RVKVMLTLHNCHEAFWVGNLKNRDLKGEEIPSQITREDDSEEEEEEAASRLESSDDSDGE
KEESGGAKGNESDSDGSCSDSF
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtccaaaggaaaaccaaagagacagagggaatcacttccagaagaaaaccct
acatcaactgagggtgcagtgaaagctaaaagagcaagaacaagtgctgacaagggcagg
tcaagtaatgtggctcctattgttgacaaatcaacatttggaaagatggtaatggatgct
ggattctgtcttattgctggagatcatcctaatcaactcaatgtagaccaggtgatgttt
cagaaaaagctgaggaaatcagtcaagtctaggatgaatgtaggagagacagttgaagat
tttatatcaggtctccaaaatcatattgaggatccagtcaggttcaaatacagtcttctc
ccaacttgctcctctgctgaatgtgagagcgccaggggagggaatcaggatagtctcatc
agattgattcttgccattgatgaactacagcctgctctggtcaatatgttgcttgaaaag
ctgcctgaatttatgggagaagaagatagcatgtttgactacagtgaggccgttgactta
cctaaacttattctcaaccagtttcattggatggacaatgttatcaacagcaaggagatg
acagataagatgcttgagatggtagagatatcgtcaccatcggtccagagagagatcatt
gcttgtgttccagaagtagttagtgatcaagaacataatgagctagctaacagattgaaa
aatatgttagaatgtaattctcagctgactgtaccaatcattgatgccttggataacctc
aacttaactccagaacttcttagagaggttcggggttcagctctacagagtcttgtatct
gctgatctagatgacttacctgttgttatcaagtttattctccagtctgtgtcttctact
gactctttggaggttatcagtgaactaagaaggaacttggatttccacacatctcttcca
ccatcttccgcatctacaccctttgcgagatcatctacctcagggaatgcatcaagtcat
aagaagactgttgatagcgagatgctgatcctagaaaccattaaatcaaccatgagattc
aacaaagtattagcagatggatggcagaaggctattgagaatgtatcagatgcagtcggt
cacaaggttcttgatatatttgtacttctcatatctcatgctgtggccaatagaaagaaa
tctgttgaagcagtcttcagacataaagtacgcaaaggacacttcacagaagaattgctt
caagcaacattcacatcacatgcccaggtgataagagattatttaggatcattgctgtgt
attgcagagaaactattgagatcgcctgagcctcaagtcagtcagtttggatcgaaggtc
tatcaaacagcattcaatgcatttgatgtatatagtaaacaggaggttgtaggagcattg
gtaacacacattggcagtggtttatcagatgagatggattcagcgcttgacattctctct
tatcttgcagcatcccataccaaggatcttgcaccttttgctgttttcatcaaaggtgtt
cttgactacctagataacttatcaatgacccaggtcaagaaactcttctcagttctagct
atcttagcatacagaggaggtagctctggatctacactccaagatgagttgcagattgtt
gtccgtaagaatctaacaagcaatagtcccaagtacaagcgcatgggagtggtagctgcc
ctaatggttatacagaacatggctaggaaagggattgattctgggagtggtaagcaagct
ctagcatcattacctcaggatatcttcaagcaagtgataggtcttcttgatctggtcaaa
tcaagctgtggtcaagcacccgaggctgcagctctattctttgatgaattggcaaacatt
gttcagaagggtgacttacatcctaagatactggaaactgttggtgagaacatccttgat
gattttcaaacagactttgtggttgatattgaagctgaagccaccactgtgaattatggc
ttaccaatgggtgagatgtacagtatggagggggaggagtcacaaggaggtgtggccatc
aatctcctcccacttatttacaaggcagagaaagacaaacagaagactgttgctcaaaat
aagaaggcacaaagatgcgtctccccagcctgtctggccccgcatttccgtttacttcgt
ttctgtgagcaagctcaacatgatggtagcttagaagggattgatgctctccttggttgt
cctctatactcatctaaagatgacctggttgctaagatacactcactatccaaacaagag
aaagaactcatgtctaccaatctattcctctgcatcaactggttccgtgaggcaatcaat
ggttttgcaacccttcaagacccagagatgagaggcaaggtgttaggaagactacagaac
atcaccagactacaagaactcttagaaacatgtcttgaagctactccaggtttcattcct
cctgttgctcattttgattgtgagcagcctcagacgagtccattaatgacagcacagaat
tcatcatcatcaagtaaaggtggcaagaaaggaaggaaacctaaagatgataaaaagaaa
ggagatgaagatacaagtgaaagcacagtcctgacagaatatgactacgtctcacaggag
aataacaaaccaaatgataccacaatggctgatcctatgaaggaaggatctaagaagagt
aacaaggatacacctatcattgactggtctaggtctagagcattctttcgagagctggat
ttagatgttttctctgttcttggttgtgggctcgtatcaaggactatactagacacagag
atgaatacaaaggaggtacatgtcttgcagcttcaacctcgtgagttagagtttctcctt
caagatctcaatagcaaactagaccacgcccttcctgcctcacttggaaggaggacattt
ctaaagtctaaatgggacaagacgattgggttctcacacttggaccagctcagcccaaaa
caagtggccaagaaagctgtcaaaatgttgcccttgctctgccagcatctagaggcaacc
agtggattctttcagacattgatggctcagaatgatggtatgatagatggtccaggatgg
aatacagaagaagctcatcagatgggacgatgtcttcatctcttactccaagcccttctt
gctctcttctcatggagtggctttgtgtcatcagtaaatcaatctatctttgaggaagca
atggctactctcagctctcgtattgctgatgctggcaagacttcctttaccttcactcaa
tctcttaaacatgctgctcattacatagagaatttctctggtactgtacccaatcttgcc
atcggtgtaactatccttaaagtcatggttagcatcaacaacaaaggatctacacctgct
gctaacaagaaaatagcaaccctagctgaatctttgttgaagagagattggttagatgaa
gacggtgttcgagagaaaggagccaaatacaatgagcttcttcagacagttattgagatc
tacttgcatcatagtgaagattctttatcatctgttgagatgctatgtacagaagcatta
cctgaacttgatccatcagataagaacgtagcatcagctctcttcccaaccctcaatagg
aacaccctaagctgttactaccatgttatgttgaaggagttagtttcctgcgtccagcga
ttacagccttctatgaggaaatcacctgatgtccagggtgagacctttgaccgttggaga
tcatcggtcaaagtcttctctgctctggtcaatgtcatcaaagtgtttgatcttaggaac
aatatcaagacactacttaagtatggtagaatgttccttgatatcttcctacgtcatgca
atgcctctccttgataagttgttcagaattgagaaagatgatgtacaagctcttctaaag
atgctgcaacaatgcactagatatctacaacacatctgtagccattcaaaggttgccaag
gatattgccctgactagtcatgtacctcagatgaaacgtctccttgagcaatttgtctac
agagtcaaggttatgttgaccttacacaactgtcatgaagcattctgggtaggaaacctc
aagaatagagatctcaagggagaagagattccatctcagataacaagagaagatgatagt
gaggaggaagaagaagaagcagcaagtagattagaatcatctgatgatagtgatggagag
aaggaggagagtggtggagctaaaggtaatgaatcagacagtgatggctcctgcagtgac
agcttctga
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integrated database retrieval system
