Lytechinus variegatus (green sea urchin): 121410114
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Entry
121410114 CDS
T11173
Name
(RefSeq) peroxisomal sarcosine oxidase-like
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00260
Glycine, serine and threonine metabolism
lvg00310
Lysine degradation
lvg01100
Metabolic pathways
lvg04146
Peroxisome
Module
lvg_M00974
Betaine metabolism, animals, betaine => glycine
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121410114
00310 Lysine degradation
121410114
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121410114
Enzymes [BR:
lvg01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
121410114
1.5.3.7 L-pipecolate oxidase
121410114
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Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
Thi4
FAD_binding_2
FAD_oxidored
GIDA
FAD_binding_3
Pyr_redox_2
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
121410114
NCBI-ProteinID:
XP_041457928
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All DBs
Position
3:7287716..7313249
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AA seq
404 aa
AA seq
DB search
MASPSEQFPDIHSVNAVYDVLIVGAGIQGSSTAYHCIKQGLKTVLLEQFSLPHSRGSSHG
QSRIIRYSYEQTHYSQMMTEAFPMWKDLEKETNTQLYKKTGLLTISLPPMRSLYDSSLEQ
MRKFKRAHRILDHEALKKEYPEMNFPKDSLVFMDYDGGTLRADKALRAYQDRFKDCGGIL
KEEEKVLEITPGPVVIVRTNKATYKTRQLILTPGAWAQKVLKPLGIDVPLTVTRINVPYW
QEKETGVMSKVPNLIFQLENDKHVYALQELEYPGLTKVPYHGGADIIDPDYRDTVHNEAV
GRKSDIQLLKRFIAKHFPLLLSEPTVIETCMYTETPDSELIMDRHPLYHNIIVCCGCSGH
GFKLAPSVGKILCRMAMGKESHINITALSFKRFKNSCLTNKAKL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccatcggagcagtttcccgacattcactctgtaaatgccgtgtacgatgtc
ttgattgtaggagctggtattcaagggtcttctacagcttatcattgtataaagcagggg
ttaaaaaccgtgctattggaacaattcagtctaccccattcacgtggaagttcccatggc
cagtctagaatcatccgctactcttacgaacagacacactactctcagatgatgactgaa
gctttcccaatgtggaaagatttggagaaagaaaccaatacacaactttacaagaagaca
ggtcttttgactatctcactcccaccaatgcgttcactgtatgacagttctttggaacag
atgagaaagtttaaaagagcacacaggatccttgaccacgaagctctcaagaaagaatac
ccagagatgaattttccaaaagattcactggtctttatggattatgatggaggtactcta
agagcagacaaggctctacgtgcataccaggatagatttaaggattgcggaggcattctg
aaagaagaagagaaggttcttgagatcacccctggtcctgtcgtaattgtaaggacaaac
aaggccacatataagacccgtcagctcatcctcaccccaggagcatgggcacagaaggtc
ctcaagccacttggtatagatgtacccttaacagtaacccgtatcaatgtaccttattgg
caggagaaagaaacaggagtgatgagcaaagtaccaaatctcatttttcagcttgagaat
gataaacatgtatatgcactacaagaattagaatatccaggcttaacaaaggttccatat
catggtggtgctgatataattgacccagattacagagatactgtacacaatgaagcagtt
ggacggaaaagtgatattcaacttctgaaaaggtttattgcaaaacacttccccctattg
ttgagtgagccaactgttattgaaacttgcatgtacacggagactccagatagtgagctg
ataatggacagacatccactgtatcataacattattgtatgttgtggatgctcgggccat
ggatttaagctggcaccttccgttggtaagatcttatgtagaatggctatgggtaaggaa
tctcatatcaacatcacagcattaagcttcaagagattcaaaaactcatgtctgaccaac
aaggcaaagttataa
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