Lytechinus variegatus (green sea urchin): 121410517
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Entry
121410517 CDS
T11173
Name
(RefSeq) ras-related protein Rab-7a-like
KO
K07897
Ras-related protein Rab-7A
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04137
Mitophagy - animal
lvg04140
Autophagy - animal
lvg04144
Endocytosis
lvg04145
Phagosome
lvg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121410517
04145 Phagosome
121410517
04140 Autophagy - animal
121410517
04137 Mitophagy - animal
121410517
04148 Efferocytosis
121410517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121410517
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121410517
04031 GTP-binding proteins [BR:
lvg04031
]
121410517
Membrane trafficking [BR:
lvg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
121410517
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121410517
Exosomal proteins of other body fluids (saliva and urine)
121410517
Exosomal proteins of colorectal cancer cells
121410517
Exosomal proteins of bladder cancer cells
121410517
GTP-binding proteins [BR:
lvg04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
121410517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
RsgA_GTPase
cobW
ATP_bind_1
nSTAND3
AAA_24
AAA_22
AAA_16
Septin
PduV-EutP
AAA_7
NTPase_1
AAA_5
NB-ARC
ATPase_2
SRPRB
NACHT
AAA_14
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
121410517
NCBI-ProteinID:
XP_041458601
LinkDB
All DBs
Position
3:22469074..22493564
Genome browser
AA seq
205 aa
AA seq
DB search
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRFVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPNSFKSLDSWRDEFLIQASPRDPEHFPF
VVLGNKVDLDNRIVSAKRSQSWCDSKNSIPYFETSAKESINVEQAFQTIAKNALAQEPDD
STYQDFPSQIKLDNDNKGKSEGCAC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaagaaagaaggtcctccttaaagttatcatacttggtgacagtggagttggc
aagacttcactcatgaaccagtatgtcaacaaaaagtttagcaatcagtacaaagcaact
attggtgcagatttcctcacaaaagaagtcatggttgatgacagatttgtcacaatgcag
atatgggacactgctgggcaagaaaggtttcagagcttaggtgtggccttctacaggggg
gcagactgctgtgtactggtctttgatgtcacatcacccaattctttcaaatcactggac
agctggcgagatgaattcctcatccaagctagtcctagagaccctgaacacttccccttt
gtcgtattgggcaacaaggttgacttggataacagaattgtttctgccaagagatctcaa
agctggtgtgacagcaaaaacagcatcccatactttgagaccagtgcaaaggaaagcatc
aatgttgaacaggccttccaaacaatagccaagaatgcccttgcacaagaacctgatgat
tcaacgtaccaggatttccccagccagatcaaacttgataatgacaacaagggaaaatca
gaaggatgtgcatgctga
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