Lytechinus variegatus (green sea urchin): 121410602
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Entry
121410602 CDS
T11173
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04145
Phagosome
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121410602
09142 Cell motility
04814 Motor proteins
121410602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121410602
03036 Chromosome and associated proteins [BR:
lvg03036
]
121410602
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121410602
04147 Exosome [BR:
lvg04147
]
121410602
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121410602
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121410602
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121410602
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121410602
Exosomal proteins of other body fluids (saliva and urine)
121410602
Exosomal proteins of colorectal cancer cells
121410602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121410602
NCBI-ProteinID:
XP_041458734
LinkDB
All DBs
Position
3:complement(25468243..25479755)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctctatccacgtcggccaagccggagtccaaattggtaatgcctgc
tgggaattgtattgccttgagcatggaatccagcctgatggtcagatgccctcagacaag
accatcggaggtggcgatgattccttcaacactttcttcagtgagaccggagctggcaag
catgttccacgtgcagtctttgttgacttggagcctactgttgttgatgaggttcgtact
ggaacttacagacagcttttccatcctgagcagctcatcactggcaaagaagatgcagcc
aacaactatgctcgaggtcactacaccatcggcaaggagatagttgacctcgtcttggac
aggatcaggaaactggcagaccaatgtaccggtcttcaggggttccttatcttccatagc
tttggaggtggtactggttctggttttgcctctctcctcatggaacggttgtctgttgac
tatggtaagaagtccaagcttgaatttgctatctacccagcaccccaagtctccactgct
gttgttgaaccctacaactccatcctcaccacccacacaactctggagcattctgactgt
gcctttatggttgataatgaggctatctatgacatctgcagacgcaatcttgacattgag
cgaccaacctacaccaacctcaaccgtctgattggtcagattgtatcgtcgatcactgct
tctcttcgatttgatggtgcgctcaatgttgatcttacagagtttcagaccaacctggtg
ccatatccccgcattcacttccccttggttacctatgcacctgtcatttctgcagagaag
gcttaccatgagcagctgagcgtggcagaaatcaccaatgcttgctttgagccagccaac
caaatggtcaagtgtgacccacgccatggcaaatacatggcatgttgcatgctttaccgc
ggagatgtcgtccccaaggatgtcaacgccgccattgcaacgatcaagaccaagcgcacc
atccagtttgtcgactggtgtccaacaggcttcaaagtaggtatcaactaccagccaccc
acagtcgttcctggtggtgatcttgccaaggttcagcgtgccgtctgcatgttgagcaac
accactgccattgcagaggcttgggctcgtcttgatcacaagtttgatctgatgtatgcc
aagcgagcctttgtccactggtatgttggtgagggtatggaggaaggagagttctccgag
gctcgtgaggatctggcagctctggaaaaagattatgaagaagtaggtgttgactctgta
gagggagaggcagaggaggaaggagaggaatactag
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