Lytechinus variegatus (green sea urchin): 121410709
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Entry
121410709 CDS
T11173
Name
(RefSeq) THO complex subunit 7 homolog isoform X1
KO
K13176
THO complex subunit 7
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
lvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121410709
09122 Translation
03013 Nucleocytoplasmic transport
121410709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121410709
03041 Spliceosome [BR:
lvg03041
]
121410709
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121410709
Spliceosome [BR:
lvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121410709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
TPR
OVT1
FKBP15
DUF724
PUMA_CC
HR1_TOCA
zf-C2H2_fungi_2
Stathmin
COG6_N
Methyltransf_31
DUF4407
CENP-F_leu_zip
SoxA-TsdA_cyt-c
Sec8_N
Exonuc_VII_L
APG6_N
Peptidase_S10
FliJ
CENPH
Motif
Other DBs
NCBI-GeneID:
121410709
NCBI-ProteinID:
XP_041458894
LinkDB
All DBs
Position
3:complement(29351474..29360910)
Genome browser
AA seq
208 aa
AA seq
DB search
MSTDEEVIRKRLLIEGESGGDDRRISNLLKTFVKWCHTDQSNEECTAAYQKMLMMLCQVD
FAMERTQMIHQMNIREMSNYEELYSTIERNIKDAHQQISACKTELQDAKRERKNRQEYDT
LAKVIQKQPDRKETLNKLKELDKDLGELNSTKESLDQKLEDRKKQFHVLISAIHELQRIL
DTDDGSQKLNTTSDSMLSDTMDTSLTDK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggatgaggaagtgatacgaaaaaggctgcttattgaaggagagagtggaggt
gatgacagaagaatcagtaatctactcaaaacctttgtgaaatggtgtcacacggatcag
agcaatgaagaatgcactgctgcatatcagaagatgttgatgatgctatgtcaggtagac
tttgccatggagaggactcagatgattcatcaaatgaatatcagagagatgtccaactat
gaagagctctactccaccattgaacgcaacatcaaggatgctcaccagcagataagtgct
tgcaagacagagctacaagatgcaaagagagagagaaagaatagacaggagtatgataca
ttagcaaaggttatccagaaacaacctgacaggaaagaaactttgaacaaactaaaagag
ctggataaggatcttggtgaattaaatagcactaaagaatctctggaccagaagttggag
gataggaagaagcaatttcacgttctcatcagtgctatccatgagctacagaggatatta
gacactgatgatggatcccagaaactcaataccacatcagactccatgctcagtgacacc
atggatacttccttgacagataagtga
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