Lytechinus variegatus (green sea urchin): 121410841
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Entry
121410841 CDS
T11173
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121410841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121410841
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121410841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Methyltransf_25
FUT8_N_cat
KxDL
Motif
Other DBs
NCBI-GeneID:
121410841
NCBI-ProteinID:
XP_041459100
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All DBs
Position
1:complement(29911809..29938638)
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AA seq
556 aa
AA seq
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MSFNFGSTGTFGGQNKPSFGGFGSTSTGTSGFSFGSTTKTTAPTLGFGTSTATTTSSSAF
GFGIKPIGTATTSTGGGFGFGSGGLGGNTQTTSSASGFNFGTSTSTGGFGAKPGGSSLFG
GGGFGQTATSSSSLKFGFGGLNTGTTTTSGLGTGFGAQPQQQQQQQQLGVDNNLVLLAAA
LSVPSIYGDERDNLLAKWNQLQAFWGTGSGFVNQNTTVNFTPENPFCRFKTVGYSVKPTA
KTKDGLVVLHFKKKDTEIRAQQQQLVDSLYRIMGSKPTLSVCVEDVRPLPDDKSEVVIYI
LERLPTGATKRIPSTETFAFLNNAKIKQQLGSLGVVHMQPRQALTQTQLENYLQNPPLGY
DPRLWRQAQLDNPDPDRLIPVPLVGFDVIKTRLEYQQQETQQHQARLDLVSKDLEKLQEQ
QDTLQARIAENKRRHLELSHRVLQVMARQEVQRKQGVSIQLEEEHLRTQLEGLMAELNAP
TQMKARLNEMLSQIRLQSHLPFSRNSEQYSIDSDLQYEIRQHLKQQQEGISHLVGIIKED
LEDLKLIERGLEEATS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaactttggcagtactggcacatttggcgggcaaaataaaccatctttcggt
ggatttggttctacctcaactgggacatcaggattttcctttggtagtacaactaaaaca
actgcacctactcttggctttgggacttctacagccaccaccacgagcagctctgcattt
ggatttgggattaaacccataggaacagctacaaccagtactggtggaggctttggcttt
gggagtggtgggcttggtggaaatactcagacaactagcagtgcatctggattcaacttt
ggaacatctacaagcacaggagggttcggtgccaagccaggaggatcatctctctttggt
gggggtggctttggtcaaactgctacctctagctctagcctcaagtttggttttggtggt
cttaacacaggaacaacaactacaagtggattaggtactggatttggtgctcagcctcag
cagcagcagcaacaacaacaactaggtgttgacaacaaccttgttctgctcgctgctgct
ctatctgtacctagtatctatggagatgaaagggataacctactagccaaatggaatcaa
cttcaggcattctgggggaccggtagtgggtttgtaaatcagaataccacagtcaacttc
actccagaaaaccccttctgtagattcaagacggttggctatagcgtcaagccgacagca
aagacaaaagatggtctggttgtcttacacttcaagaagaaagacactgaaatcagggct
cagcaacaacagctggtagattcactctacagaatcatgggcagtaaaccaactctgtct
gtatgcgtagaggatgtcagaccccttcctgatgataaatcggaggtagtaatctacatc
ttggaacgtcttcctactggtgctaccaaacgcatcccatcaacagaaacctttgccttc
ttgaacaacgctaagatcaagcaacagcttggtagtttgggggttgttcacatgcaacca
agacaagcattgacacagactcagttagagaactacctccagaatcctcctctaggttat
gacccaagactatggaggcaagctcagcttgataatcctgatccagataggctgatccca
gtcccacttgttggatttgatgtaatcaagacaagattagaatatcagcagcaagagaca
caacagcatcaagcaagactggatcttgtaagcaaagacttggaaaaattgcaagagcag
caggacacattgcaggcgaggatagcagagaataagagaagacatctagaattatcacat
agagttttacaggtcatggctcgacaggaggtccagagaaaacaaggagtgtccattcag
ttagaggaggagcatcttagaacacagcttgagggactgatggcagagttaaatgcacca
acccagatgaaggctcgtctgaatgagatgttatcccagatccgtttgcagagtcacctt
ccattcagtcgtaatagtgagcagtattctattgattctgatctccagtatgaaattaga
cagcatctgaaacaacaacaagaaggtatcagccatcttgtgggtatcatcaaagaagac
ttggaagatttaaaactcattgagagagggttggaagaagcaaccagttga
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integrated database retrieval system
