Lytechinus variegatus (green sea urchin): 121410850
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Entry
121410850 CDS
T11173
Name
(RefSeq) CLIP-associating protein 1-A-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lvg03036
]
121410850
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121410850
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121410850
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
121410850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT
XMAP215_CLASP_TOG
HEAT_GCN1
CEP104-like_TOG
HEAT_2
HEAT_MROH2B_C
HEAT_EZ
RTP1_C1
Cnd1
TPR_DNAAF5
TOR1L1_N
VPS15-like_hel
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_DAAF5
XRN_M
UTP20
RteC
Adaptin_N
TPR_IPO5
GNC1_N
Motif
Other DBs
NCBI-GeneID:
121410850
NCBI-ProteinID:
XP_041459117
LinkDB
All DBs
Position
3:complement(34522192..34596887)
Genome browser
AA seq
1546 aa
AA seq
DB search
MFMNTVHNDTVHSAQIILYIIHVGLQYSSMVSQFSFMFYCFGISTICLFILQFVFERLMK
AFSHKGWRVREEVLLCLMQAINVFGASSLLLNKIVPSICKLLGDPNSQVRDTAINTLVEI
YRHVGEKVRIDLGKKGIPSSRLSIIYAKFDDVKRSGQMVVQSEQSAPAKTSASQDETDSK
PSKKSRHSKIDTSTSSWNAKAKSAVAKKVAMRAAAEAAVQKTAPAKRPAASTTQRKSISR
PSTGSSSGAVDENFFQAAYEDVPSVSIFTTKQLEDDLSKMSTILSNDKADWELRVTALKK
LRAFIIAGAAEYDCFGQSLRQMEEALILSVKDLRSQVLREACVTLAFLSIRLKRQFDHAA
EVVLPHLFILIQNSAKVMATSSMVAIDVIIRHTHSPRLIPIMKSNATSKSTAIRKQTFTY
ISTVLNVWDTHAMERHASLLCEVIHKGIEDADSEARAVSRKAFWKFSEHFKSHADKMFNN
LDASKQKMLQGELSQASSCTSLDGRPLSRSSTASSHENLRLARDYKTASLPRRSVASRAS
RTSDSSDKPALLNQRSSSEINLAAASRARSRYSSAGQRAASGAAARISRSKSTSRESLAA
TPRGSSLLQTPNGRAGRTRSRIGVSQSQPGSRSNSRSSSPSTASSRYSNIQTNGRTRRKS
GIPVPRSQGASREASPNRYGYASARERRQSGSSLGPAQREPKEKQNIMAQRVLVPGQDAE
AALADALISAQRALRSNYGYGYDSDYSDNLTQKVMQRKRYENFSDDESDASSVCSVGSYG
SGPAKIIEDVSEVLNKMASPAWSERKEGLIGLQYTLHSNRALSRSEIKRITELFTRMFAD
PQSKTFSLFLETLGEFIIVHKTELLDWLFVLITRLLQKMGSDLLGSILNKIQRTLEIVRE
SFPYEIQFRILTKYIMDQTQTPNMKTKVAMLRYMESLTDVMDPADFSNSAETRLAVSRII
GWTKEAKSPEVRRASQAVLIALFELNTPEFSMMLSVLPKTYQEGATKLLRNDLRIASTID
DEITAQEYRSKASPRSALKASPRSTGSSPRGSYASNGPPDTEFLNSEDIYDSLRRTTAEI
QNYMHSSRDDLDHVAVSKETRVDSDEVLPDLVPGIRVDSPEGKVKEYLEYRMVPDPDSML
SPPPITHSRSCGDYRTVSGARSPTPQKKLPAASSQAKSHSKGRPTLKIPSASGRGSRNQS
PAAKNRVRARSQSPSPPARANQCFTDYDHASPTPPVFSPDSYSEPAYNPLPMSTNALYRE
SASPVSSRRNHPASGDGHGIADTMGRMTLTDGNYEDETFHEDHQDILVPLLTELSNHNGR
FEERKNAMMQLIRLTRSESLSLWDDHFKTVLLLMLETLGDVESSIRAMALRVLREILRNQ
PGRFKDYAELTILKILEAHRDPHSEVVRQAEETSATLAISIAPSQCVRVLCPIIQTADCP
INQAAIKMLTKIVELMSEADLMEILPEVIAVLLKSYDHTESSVRKASVFCLVAIHNIIGD
KLKEKLADLPGCKMKLLNLYIKRAQAEKDAQTPSPSSPSALSTGSR
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgaatactgtacacaatgatactgtacattcagctcagataatcttgtacatt
atacatgtaggcctacagtacagttcgatggtaagtcaatttagtttcatgttttattgc
tttggaatatctacgatttgtctctttattttacagtttgtatttgagaggctgatgaaa
gcattttcgcacaaaggttggcgtgttcgagaggaagttctactatgtttaatgcaggct
ataaatgtatttggtgcaagttctctactattaaacaaaattgttccatcaatatgcaaa
cttcttggggatcctaacagtcaagtaagagatacagcaatcaacacactagttgagatc
tacaggcatgtaggagagaaggttaggatagacctgggtaaaaagggcattccttcatca
aggttatctattatttatgccaagtttgatgatgtgaaacggtccggacaaatggtggtg
cagtctgaacaaagtgctcctgctaaaacatcagcatcgcaagatgagactgacagtaag
ccttcaaaaaaatcgcggcattctaaaatcgacacctctacatcatcatggaacgcaaaa
gccaaaagtgctgttgcgaagaaggtggctatgagggccgcagctgaggctgctgttcaa
aagactgctcctgcaaagagacctgctgcatccacaacacaacgaaagtccattagtaga
ccatcaacaggttccagcagtggtgcagtagatgagaatttcttccaagctgcctatgaa
gatgtccctagtgtttcaatattcacaacaaaacagctggaggatgatcttagtaagatg
tctaccattctaagtaatgataaagcagattgggaacttcgagtgacagcattgaagaaa
ttacgagcattcatcatagccggtgcagcagaatatgattgctttgggcaatcactaagg
cagatggaagaagcccttattttgtcagtcaaagatctaaggtcacaggtcttacgagaa
gcttgtgtcacattagcgtttttatcaattcgtctgaagcggcagtttgaccatgctgca
gaggttgtccttccccatttatttattctcattcagaatagtgcaaaggtcatggccaca
tcaagcatggttgcaatagacgttatcattaggcatacacattcacctaggcttataccc
attatgaaaagcaatgcaacttctaagtcaactgccattaggaagcaaacgtttacatac
ataagcacggtattgaatgtatgggacacacatgcaatggagaggcatgctagccttctc
tgtgaggtcattcacaagggtattgaggatgcagattcagaagctagggctgtctcaaga
aaagcattctggaagttctcagagcacttcaagagccatgcagacaagatgtttaacaac
cttgatgcctccaagcagaagatgctacaaggagagctgagccaggcatccagctgtacc
tcccttgatggcaggccgctttcacgatcatccacagccagttcacatgaaaacctaagg
ttggctagggactacaagactgccagtctgccaaggagatcagttgcatcgagagcaagt
cgcacttcagattcttcggacaagcccgccctcttgaaccaacgttccagcagtgagatc
aacttggcggctgcgtcaagggcccgatcacggtactcgtcggcaggtcagagggcagcc
agtggggcggcagcacgtatttctagatctaaatcaacttctcgggagagcttggctgct
actcccagaggatcctctcttcttcaaactcctaatggtcgtgcagggagaacacgatcg
agaattggggtttcccaatcacaacctggtagcaggtctaacagccggtccagctcacct
tcgacagcctcctcaagatattccaacattcagaccaacggtaggacaaggaggaagagt
ggaattccagtgcctcgtagtcaaggggcaagcagagaggccagtcctaacagatatgga
tatgctagtgctcgagagaggcggcagagtggatcatctcttggtcctgcacagagagag
cccaaagagaagcagaacatcatggcccagagagtcctggttcctggccaagatgcagag
gctgccttagctgatgctctgatatctgcccagagagccctcaggagcaactatgggtac
ggttacgattctgattactccgacaatttgacccagaaagtgatgcaaaggaagagatat
gaaaacttttcagatgatgaaagcgatgcttccagtgtctgttctgtaggatcatatggg
tcgggaccagcaaagatcattgaggatgtatcagaagtcctaaacaagatggcaagtcct
gcatggtcagagcggaaagaagggttaataggtcttcagtataccctacatagcaacaga
gcactaagtcggtctgaaataaagagaatcacagagttgtttacaaggatgtttgctgac
ccacagagcaagacattcagcctgttcttagagacattaggagagttcatcatagtgcac
aaaactgagctactggactggttatttgtactcatcacaagactattacagaagatgggg
tcagatttattaggttctattctcaacaaaattcaaaggacactagaaattgtcagggaa
agcttcccatatgagattcaatttaggatactaaccaagtacattatggaccagacacaa
acacctaacatgaagacaaaagttgccatgttacggtacatggagagtttgacagatgtg
atggatcctgcagacttcagtaactcagcagaaaccaggttagctgtctcaagaatcatt
ggatggaccaaagaggccaagagccccgaagtcaggagggcatcccaagctgtattgata
gccttgtttgaactcaacaccccagaatttagcatgatgttatctgtactacccaagacc
tatcaggagggggcgaccaagctcttgcgcaatgacctgcgtatagcatccaccattgat
gatgagattactgctcaggagtatagaagtaaagcttccccaagatcagccttgaaagct
tcccctcgatcaacaggttcctcaccccgtggcagctatgccagcaacggccctccagac
actgagttcctcaactcagaagacatctatgactcactccgccgaaccaccgctgaaata
cagaactacatgcacagcagccgcgatgatcttgatcatgtcgcagtcagcaaggaaacg
agagtggacagtgatgaggtattgcctgacctggtgccaggcataagagtggacagtccc
gagggcaaggtcaaggagtacctggagtaccgcatggtacctgacccagactccatgctg
tcacccccaccgatcacccacagtagatcatgcggggactaccgtacagtaagcggtgca
cgctctcccaccccacaaaaaaagctcccagctgcctcttcccaagctaagtcccatagc
aaaggcagacccacattgaaaatcccatcagcaagtgggcgggggtcacgcaaccaatcc
cctgctgccaagaacagagtccgtgcacgttcccagtccccatctccccctgctcgtgct
aatcaatgtttcacagattatgatcatgcctctcctaccccaccagtcttctctccagat
tcctattctgaacctgcctataacccccttcctatgtccaccaatgctttgtatcgtgag
tctgcttctcctgtctcttctcgtagaaatcatccggcctcaggggatggacatggcata
gcagatacaatgggtagaatgacattgactgatggaaactatgaggatgaaactttccat
gaagatcaccaagatatactggttcctctactgactgaactatcaaatcacaatggaagg
tttgaagagagaaagaatgccatgatgcagttaatccgcctcactcggtctgagagcctg
tcgctttgggatgaccacttcaagacagttctccttctaatgctagaaaccttgggagat
gtagagtcatcaatacgagccatggcattgcgtgtccttagagagatcttgaggaatcaa
cctggtcgctttaaggattatgctgagctcactattctcaagatattagaggcacatcgt
gacccacacagtgaagttgtaaggcaagcagaagagacttcggccaccctagctatttcc
attgcccctagccagtgtgtccgagtcctatgtcccatcatccaaactgctgactgtcct
atcaaccaggctgccatcaagatgttgaccaagattgttgaattaatgtcagaagcagac
ctaatggaaatcttacctgaggtgatagctgttctactcaagtcctatgaccacactgag
agtagtgtccgcaaggccagtgtcttttgtcttgtggccatccacaacatcataggtgat
aaactcaaagagaaactagcagatctaccaggatgcaagatgaaactgttgaacctgtat
atcaagcgtgctcaagcagaaaaagacgctcagacgccttctccaagtagtccttctgct
ttatcaactggaagcagatag
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integrated database retrieval system
