Lytechinus variegatus (green sea urchin): 121410935
Help
Entry
121410935 CDS
T11173
Name
(RefSeq) caltractin
KO
K10840
centrin-2
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121410935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121410935
03036 Chromosome and associated proteins [BR:
lvg03036
]
121410935
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121410935
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
121410935
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121410935
Centrosome duplication proteins
Centriole replication proteins
121410935
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121410935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
AIF-1
EF-hand_5
EF_EFCAB10_C
EH
EF-hand_14
Dockerin_1
SurA_N_3
SRI
DUF7645
SurA_N_2
SUB1_ProdP9
FlgD
DUF5580_M
LETM1_RBD
TerB
FCaBP_EF-hand
SPEF2_C
MecA_N
CNNM
MJ1010-like_2nd
Motif
Other DBs
NCBI-GeneID:
121410935
NCBI-ProteinID:
XP_041459266
LinkDB
All DBs
Position
1:30264257..30278395
Genome browser
AA seq
171 aa
AA seq
DB search
MTSRYTKTTLGGGQRKKQGPKPELTEEQKQEIQEAFDLFDTEGAGTIDAKELKVAMRALG
FEPKKEEIKKMIQDIDKEGSGTIDFNDFLQLMTAKMSEKDSKEEILKAFKLFDDDETGKI
SFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINEQEFLRIMKKTSLY
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcgttataccaagaccaccctgggtggggggcagagaaagaagcaaggtcca
aagccagagcttacagaagaacaaaaacaagagattcaagaggcatttgatctatttgat
acagaaggagcaggcacaattgatgctaaggaactgaaggttgctatgagagcacttggt
tttgaacccaagaaagaagagattaaaaagatgattcaggacattgataaagaaggttca
ggaacgattgattttaatgacttcttacaactcatgactgccaagatgagtgaaaaggac
tctaaagaggagatcttgaaagcattcaagctctttgatgacgatgagacgggcaagatc
tctttcaagaatctcaaaagggtagctaaagaacttggtgaaaacctcacagatgaagag
ctacaggaaatgattgacgaggcagaccgagatggcgatggtgaaatcaacgagcaagaa
ttcctcaggataatgaagaagacaagtttatattaa
DBGET
integrated database retrieval system
