Lytechinus variegatus (green sea urchin): 121410949
Help
Entry
121410949 CDS
T11173
Name
(RefSeq) POC1 centriolar protein homolog A-like
KO
K16482
centriolar protein POC1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lvg03036
]
121410949
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lvg03037
]
121410949
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121410949
Cilium and associated proteins [BR:
lvg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121410949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
eIF2A
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
Beta-prop_ELP1_1st
Beta-prop_DCAF12
PROPPIN
PEP5_VPS11_N
Cytochrom_D1
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
121410949
NCBI-ProteinID:
XP_041459292
LinkDB
All DBs
Position
3:complement(38046433..38076938)
Genome browser
AA seq
456 aa
AA seq
DB search
MKQLASGGMDSCLMVWNFKAQMRAFRFVGHKDAVLSVNFSPSGHLVASSSRDKTVRLWIP
SVKGESTVYKAHTATVRSVQFSSDGQHLLTASDDKTVKVWTVHRQRFQFSLTQHSNWVRC
AKWSPDGRLIVSCSDDKTVKVWDRSSKECIHSFFEHGGFAHSVAFHPSGTCIAAAGTDNT
VKVWDIRMNKLLQHYQAHSGAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLFYTLHGH
QGPVTAVAFSRNGEHFASGGGDEQVLVWKTNFDKIDYNEVLQSHKARSQTQPPPHIHDIH
PRSPQHLHQGGTTRQTSTDINAQSELRNTVTAPPDVMNLGPALFSQNGAMGHTAAAGAAT
SGLHDLDITSTDQERRGMVNGIGPSSHPPPPPSTVPLEVKEIPPGLAQTLENMVGQLDVL
TQTVNILEQRLTMTENKLREVLDNQQKITLQVRPTE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcttgcctctggtggaatggactcctgtcttatggtatggaacttcaaggca
cagatgagggctttcaggtttgttggccacaaggatgctgtcctttcggtcaatttctcc
ccatctggacatcttgtagcatcctcatcaagggacaaaacagttagactttggatccct
agtgtgaaaggagagtctactgtttataaagctcatacagcgacagttcgtagcgtccag
ttctctagtgatggtcagcatcttcttactgcatcagatgacaagacagttaaggtgtgg
acagttcacaggcagaggttccagttttccctgacccagcacagtaactgggtgagatgt
gccaagtggtcacccgatggtcggttgatagtatcctgtagtgatgataagacagtcaag
gtctgggataggtccagcaaggaatgcatacattctttctttgaacatggagggtttgca
cattctgtagcatttcatccgagtgggacatgtattgctgcagctggtacagacaataca
gtcaaggtctgggacatcagaatgaacaaattattacagcattaccaagcacacagtgga
gcagtgaatagcctctctttccatccaagtgggaactatctgatcacagcttccaatgat
tcaacccttaaaattcttgatctcctagaagggcgtctcttttacacccttcatggccac
cagggaccagtgacagctgtagccttttccagaaacggagagcactttgcatcaggaggt
ggagacgaacaggtgttagtatggaagaccaactttgacaagattgactacaatgaggtc
ctccagagtcataaagcaaggtcccagacccagccacccccacatatacacgacatacac
cccaggtctccgcagcacctgcatcagggtgggacgacacgtcagaccagcacggacatc
aatgcacaatctgaactgagaaacacagtgaccgccccaccagatgtcatgaacctaggc
ccagctctcttttcacaaaatggggcaatggggcacactgctgctgctggtgctgctaca
tctggactccatgatcttgatatcacttcaacagaccaagaaagaaggggtatggtgaat
ggtattgggccatcatcacaccctcctcctcctccttccactgtacctctagaggtaaag
gagatcccaccaggcctagcacaaactcttgagaacatggtgggtcaactggatgttctt
acacagactgtgaacatacttgagcagaggttgacaatgactgagaacaagttacgtgaa
gtcctcgataaccaacagaagatcacgctgcaagtcagaccaacagaatga
DBGET
integrated database retrieval system
