Lytechinus variegatus (green sea urchin): 121411080
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Entry
121411080 CDS
T11173
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121411080
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
121411080
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
121411080
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
DAHP_snth_FXD
Exo_endo_phos_2
CBP4
Motif
Other DBs
NCBI-GeneID:
121411080
NCBI-ProteinID:
XP_041459514
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Position
3:42852820..42873667
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AA seq
583 aa
AA seq
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MKILTWNINGLRACRIPLKELFTNLDADIICLQETKITSKYRDQLDNDLVNVDDYNAYFS
FSKKRSGYSGVATYCKNSHTPVIVEEGLTGFLSRGSNQSLIGCYGDQSEYTPEELQSIDA
EGRTIITQHQYRKKDGTTGDLVIINVYCPRADHDNPERISFKMRFYGILQLRAEALLQSG
KSVVIVGDVNASHRRIDHCDPSGNGGKFESHPSRRWLDGFLKDCSCPKEENTSPSSPDQE
LNDKERQSHNDSNIDNEDLPSKDNLFVDTFRYFHPTRENAFTCWSTLTGARQTNYGTRID
YIIADERLCIDELTECDIMPDFEGSDHCPVKATLRGGCSPAEQLHSLCAKLMPEFAGKQQ
KLSNFFQKVSPSKKFEIHGKAMSGENQQGGGSRLGVGKREGQSLMGNSSKRSKTDAKVAK
TGNIASFFKKKVDAKLQSQTDLEIHKVFTSLDDPSSLPTSRRSVGDINGSVGSQSRVSDI
IVDTGICSSNDSVPDTSHTKETRQEHVEAKPKAKQQLSSTWKNLFKGPPPPPKCRGHQEP
CLLRTVKKAGPNLGKQFFVCNRPEGHKNNPEARCNHFEWVTKR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgacatggaatattaatgggctccgagcttgccgaattcctctcaaggaa
ttattcaccaatctagacgcggacattatatgtcttcaagagacgaagataacaagtaag
tacagagatcaactagataatgatttagttaatgtggatgactacaatgcttacttcagt
ttctccaagaaaagaagtggatattcaggtgtagcaacttattgcaaaaatagccatacg
cctgtgattgtagaagaaggtttgactggctttctctctcgtggatccaaccagagtctt
attggttgctatggagaccagtctgagtatactccagaagagttgcagtctattgatgca
gaaggcaggaccattatcactcagcatcaatacaggaagaaagatggtacgaccggagat
cttgtcataatcaacgtatactgccctcgcgcagatcatgataaccctgagaggattagc
tttaagatgagattctatggtatcttgcagctccgagctgaggccttgctgcagtctgga
aaatctgttgtgatcgtaggtgatgtgaatgcttcacacaggcgtattgatcactgtgat
ccaagtggtaatgggggtaaatttgaatctcatccaagtaggagatggctagatggattc
ttgaaggattgcagttgtccaaaggaggaaaatacatcaccatcatctccagaccaagag
ttaaatgataaagagaggcaatcccacaatgacagtaacattgacaatgaagatttgcca
tcaaaagataacctctttgtagacacttttcgctacttccatccaacacgggagaatgca
tttacctgttggtccactctaacaggggctcgacagacaaactatgggacaaggattgat
tacattattgctgatgagcggttgtgtattgatgagttgacggagtgtgacattatgcct
gactttgaaggatctgaccactgccccgtcaaggccactctacgaggtggctgctcccca
gcggaacagctgcattcattgtgtgccaagctcatgcccgagtttgcagggaagcagcag
aaattgtccaacttcttccagaaagtgtctccttccaagaagtttgagatccatgggaag
gctatgtccggggagaatcaacagggaggtgggtccagactgggtgttggtaagcgagaa
gggcagtccttgatgggtaactcaagtaaaaggtccaaaactgatgccaaggtggccaag
acagggaacattgcaagttttttcaagaaaaaggtagatgcaaaactccaaagccagact
gaccttgaaattcacaaggtatttaccagtctggatgatcccagttcactgccaaccagt
cgaagaagtgtcggagacatcaacggcagtgttggttctcaaagtcgtgttagtgacatt
attgttgatactggcatctgtagttccaatgactcagtgcctgatacatcccataccaaa
gagacacgtcaagaacatgttgaagccaagcccaaagcgaagcagcaactatcatctact
tggaagaacctctttaaaggtcctccacctccaccaaagtgcagaggacaccaagagcct
tgcctattgcggacagtcaagaaggctggacccaacctggggaagcagttctttgtgtgc
aacagacccgagggccataagaacaaccctgaggcaagatgtaatcactttgaatgggtt
accaaaaggtga
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